Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CPSF7Q8N684 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CPSF7Q8N684 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 AC026271.2-201ENST00000428091 497 ntBASIC20.45■□□□□ 0.86
CPSF7Q8N684 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.45■□□□□ 0.86
CPSF7Q8N684 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CPSF7Q8N684 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CPSF7Q8N684 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 AC233992.3-201ENST00000607491 485 ntBASIC20.44■□□□□ 0.86
CPSF7Q8N684 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 AP005212.1-201ENST00000581547 1997 ntBASIC20.44■□□□□ 0.86
CPSF7Q8N684 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.44■□□□□ 0.86
CPSF7Q8N684 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CPSF7Q8N684 AC003102.1-202ENST00000563394 1796 ntBASIC20.44■□□□□ 0.86
CPSF7Q8N684 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CPSF7Q8N684 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CPSF7Q8N684 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.42■□□□□ 0.86
CPSF7Q8N684 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF7Q8N684 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF7Q8N684 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF7Q8N684 BX842568.3-201ENST00000418104 571 ntBASIC20.42■□□□□ 0.86
CPSF7Q8N684 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.42■□□□□ 0.86
CPSF7Q8N684 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF7Q8N684 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CPSF7Q8N684 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CPSF7Q8N684 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.41■□□□□ 0.86
CPSF7Q8N684 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 AL034346.1-201ENST00000568244 1277 ntBASIC20.41■□□□□ 0.86
CPSF7Q8N684 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.41■□□□□ 0.86
CPSF7Q8N684 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 AC006128.1-201ENST00000624704 1661 ntBASIC20.41■□□□□ 0.86
CPSF7Q8N684 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.41■□□□□ 0.86
CPSF7Q8N684 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CPSF7Q8N684 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF7Q8N684 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF7Q8N684 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CPSF7Q8N684 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.4■□□□□ 0.86
CPSF7Q8N684 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF7Q8N684 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF7Q8N684 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF7Q8N684 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.4■□□□□ 0.86
CPSF7Q8N684 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF7Q8N684 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CPSF7Q8N684 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPSF7Q8N684 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPSF7Q8N684 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CPSF7Q8N684 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.39■□□□□ 0.86
CPSF7Q8N684 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CPSF7Q8N684 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.39■□□□□ 0.86
CPSF7Q8N684 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
CPSF7Q8N684 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.39■□□□□ 0.86
CPSF7Q8N684 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms