Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 LINC00565-201ENST00000562710 2331 ntBASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB42Q8N4Z0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.4■□□□□ 0.86
RAB42Q8N4Z0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.39■□□□□ 0.86
RAB42Q8N4Z0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB42Q8N4Z0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 KRT16P2-201ENST00000414673 1423 ntBASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB42Q8N4Z0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
RAB42Q8N4Z0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB42Q8N4Z0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms