Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 LSM12P1-201ENST00000411836 588 ntBASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 AC137767.1-201ENST00000602918 1920 ntBASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SYNPOQ8N3V7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 AL158047.1-201ENST00000445918 881 ntBASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SYNPOQ8N3V7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 RPS2P4-201ENST00000476944 856 ntBASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SYNPOQ8N3V7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 AP003097.1-201ENST00000530657 1135 ntBASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 AC100791.3-201ENST00000617619 330 ntBASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SYNPOQ8N3V7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SYNPOQ8N3V7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
SYNPOQ8N3V7 AL117328.2-201ENST00000624617 1940 ntBASIC21.33■■□□□ 1
SYNPOQ8N3V7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.33■■□□□ 1
SYNPOQ8N3V7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.33■■□□□ 1
SYNPOQ8N3V7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SYNPOQ8N3V7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.32■■□□□ 1
SYNPOQ8N3V7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.32■■□□□ 1
SYNPOQ8N3V7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.32■■□□□ 1
SYNPOQ8N3V7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 FAM21FP-204ENST00000608637 956 ntBASIC21.32■■□□□ 1
SYNPOQ8N3V7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SYNPOQ8N3V7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.32■■□□□ 1
SYNPOQ8N3V7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SYNPOQ8N3V7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.31■■□□□ 1
SYNPOQ8N3V7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms