Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 KRT17P3-201ENST00000420566 1262 ntBASIC21.52■■□□□ 1.04
SIX5Q8N196 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SIX5Q8N196 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SIX5Q8N196 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX5Q8N196 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.52■■□□□ 1.04
SIX5Q8N196 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.52■■□□□ 1.04
SIX5Q8N196 LINC01023-201ENST00000606054 436 ntBASIC21.52■■□□□ 1.04
SIX5Q8N196 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.52■■□□□ 1.04
SIX5Q8N196 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX5Q8N196 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIX5Q8N196 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
SIX5Q8N196 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
SIX5Q8N196 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX5Q8N196 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX5Q8N196 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SIX5Q8N196 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
SIX5Q8N196 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.51■■□□□ 1.03
SIX5Q8N196 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIX5Q8N196 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.51■■□□□ 1.03
SIX5Q8N196 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX5Q8N196 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIX5Q8N196 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIX5Q8N196 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
SIX5Q8N196 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SIX5Q8N196 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.5■■□□□ 1.03
SIX5Q8N196 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.5■■□□□ 1.03
SIX5Q8N196 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.5■■□□□ 1.03
SIX5Q8N196 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 KRT18P21-201ENST00000515767 1272 ntBASIC21.5■■□□□ 1.03
SIX5Q8N196 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.5■■□□□ 1.03
SIX5Q8N196 RN7SL471P-201ENST00000580476 299 ntBASIC21.5■■□□□ 1.03
SIX5Q8N196 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SIX5Q8N196 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIX5Q8N196 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.5■■□□□ 1.03
SIX5Q8N196 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIX5Q8N196 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIX5Q8N196 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.49■■□□□ 1.03
SIX5Q8N196 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.49■■□□□ 1.03
SIX5Q8N196 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.49■■□□□ 1.03
SIX5Q8N196 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.49■■□□□ 1.03
SIX5Q8N196 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 ANOS2P-203ENST00000472227 1816 ntBASIC21.49■■□□□ 1.03
SIX5Q8N196 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIX5Q8N196 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SIX5Q8N196 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 PNMA6B-201ENST00000538162 1200 ntBASIC21.48■■□□□ 1.03
SIX5Q8N196 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.48■■□□□ 1.03
SIX5Q8N196 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 AC061975.6-201ENST00000579045 1553 ntBASIC21.48■■□□□ 1.03
SIX5Q8N196 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIX5Q8N196 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.47■■□□□ 1.03
SIX5Q8N196 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.47■■□□□ 1.03
SIX5Q8N196 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
SIX5Q8N196 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SIX5Q8N196 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIX5Q8N196 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 AC092368.3-202ENST00000574180 1591 ntBASIC21.46■■□□□ 1.03
SIX5Q8N196 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.46■■□□□ 1.03
SIX5Q8N196 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SIX5Q8N196 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.46■■□□□ 1.03
SIX5Q8N196 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 AC233263.1-201ENST00000578059 224 ntBASIC21.46■■□□□ 1.03
SIX5Q8N196 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIX5Q8N196 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.46■■□□□ 1.03
SIX5Q8N196 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.46■■□□□ 1.03
SIX5Q8N196 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms