Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 RAP2CP1-201ENST00000605103 478 ntBASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 AC026471.6-201ENST00000622954 1905 ntBASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM48Q8IWZ4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 AC010542.4-201ENST00000563151 1910 ntBASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 AC007322.1-201ENST00000426983 750 ntBASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 AC010536.3-201ENST00000620306 533 ntBASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM48Q8IWZ4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 MIR663A-201ENST00000385250 93 ntBASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 DUX4L16-201ENST00000555130 1264 ntBASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM48Q8IWZ4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM48Q8IWZ4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM48Q8IWZ4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM48Q8IWZ4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 ID1-201ENST00000376105 1233 ntBASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM48Q8IWZ4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 AL024507.2-201ENST00000606070 2574 ntBASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRIM48Q8IWZ4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRIM48Q8IWZ4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms