Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.73□□□□□ -0.05
CSMD3Q7Z407 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD3Q7Z407 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 RPS2P55-201ENST00000397318 883 ntBASIC14.71□□□□□ -0.05
CSMD3Q7Z407 AC107956.1-201ENST00000494359 873 ntBASIC14.71□□□□□ -0.05
CSMD3Q7Z407 AC233702.5-201ENST00000584107 538 ntBASIC14.71□□□□□ -0.05
CSMD3Q7Z407 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD3Q7Z407 REXO1L12P-201ENST00000622156 912 ntBASIC14.71□□□□□ -0.05
CSMD3Q7Z407 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD3Q7Z407 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD3Q7Z407 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 AC053503.5-201ENST00000601508 636 ntBASIC14.7□□□□□ -0.06
CSMD3Q7Z407 AC100791.3-201ENST00000617619 330 ntBASIC14.7□□□□□ -0.06
CSMD3Q7Z407 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 AC087742.1-201ENST00000575880 1738 ntBASIC14.7□□□□□ -0.06
CSMD3Q7Z407 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD3Q7Z407 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 AL355075.4-201ENST00000554988 638 ntBASIC14.69□□□□□ -0.06
CSMD3Q7Z407 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 TSPY7P-201ENST00000431358 1114 ntBASIC14.69□□□□□ -0.06
CSMD3Q7Z407 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD3Q7Z407 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 AC092368.3-202ENST00000574180 1591 ntBASIC14.68□□□□□ -0.06
CSMD3Q7Z407 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CSMD3Q7Z407 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms