Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L2-201ENST00000561772 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L6-201ENST00000626483 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L1-201ENST00000627662 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L8-201ENST00000629013 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L3-201ENST00000630187 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L7-201ENST00000630678 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DUX4L5-201ENST00000630834 1275 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 AL049796.1-201ENST00000565336 1766 ntBASIC19.27■□□□□ 0.68
ZNF550Q7Z398 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 TPRG1LP1-201ENST00000598702 760 ntBASIC19.27■□□□□ 0.68
ZNF550Q7Z398 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF550Q7Z398 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF550Q7Z398 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.27■□□□□ 0.67
ZNF550Q7Z398 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF550Q7Z398 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 KRT18P5-201ENST00000436075 1291 ntBASIC19.25■□□□□ 0.67
ZNF550Q7Z398 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF550Q7Z398 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 AC123595.1-201ENST00000440769 1046 ntBASIC19.24■□□□□ 0.67
ZNF550Q7Z398 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 AC053503.5-201ENST00000601508 636 ntBASIC19.24■□□□□ 0.67
ZNF550Q7Z398 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF550Q7Z398 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 EEF1DP3-203ENST00000566025 782 ntBASIC19.23■□□□□ 0.67
ZNF550Q7Z398 CCDC92B-201ENST00000575506 885 ntBASIC19.23■□□□□ 0.67
ZNF550Q7Z398 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 IKBKGP1-201ENST00000612193 1073 ntBASIC19.23■□□□□ 0.67
ZNF550Q7Z398 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF550Q7Z398 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms