Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.08■□□□□ 0.48
COLCA1Q6ZS62 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 KRT16P2-201ENST00000414673 1423 ntBASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 KRT18P61-201ENST00000585825 1298 ntBASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
COLCA1Q6ZS62 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 AC019069.1-201ENST00000610008 1333 ntBASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 AC034268.1-201ENST00000441047 882 ntBASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 KRT18P20-201ENST00000548986 1279 ntBASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COLCA1Q6ZS62 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.05■□□□□ 0.48
COLCA1Q6ZS62 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 AC026271.2-201ENST00000428091 497 ntBASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 AC087623.3-201ENST00000607047 1098 ntBASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COLCA1Q6ZS62 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 KRT19P1-201ENST00000405746 1186 ntBASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 AC120498.10-201ENST00000621827 505 ntBASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
COLCA1Q6ZS62 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms