Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC141Q6ZP82 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 AC068473.5-201ENST00000616428 2072 ntBASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CCDC141Q6ZP82 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 SAPCD2P1-201ENST00000395413 1184 ntBASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 PTPA-214ENST00000423100 988 ntTSL 2 BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 UNC93B4-201ENST00000505679 747 ntBASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC141Q6ZP82 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 MCRIP2P1-201ENST00000394346 511 ntBASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 AP006294.2-201ENST00000641667 209 ntBASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
CCDC141Q6ZP82 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC141Q6ZP82 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 AL596275.1-201ENST00000423464 877 ntBASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 AL589743.5-201ENST00000616611 1050 ntBASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 AC010542.4-201ENST00000563151 1910 ntBASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
CCDC141Q6ZP82 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC141Q6ZP82 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 RHOD-202ENST00000532559 538 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 PNMA6B-201ENST00000538162 1200 ntBASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 FAM99A-202ENST00000538190 1989 ntBASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 VMO1-204ENST00000441199 741 ntTSL 2 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC31.52■■■□□ 2.64
CCDC141Q6ZP82 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CCDC141Q6ZP82 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
CCDC141Q6ZP82 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CCDC141Q6ZP82 AC007322.3-201ENST00000426526 701 ntBASIC31.5■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms