Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CASC1Q6TDU7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CASC1Q6TDU7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.54■■□□□ 1.68
CASC1Q6TDU7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.54■■□□□ 1.68
CASC1Q6TDU7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CASC1Q6TDU7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
CASC1Q6TDU7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CASC1Q6TDU7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CASC1Q6TDU7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CASC1Q6TDU7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.5■■□□□ 1.67
CASC1Q6TDU7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CASC1Q6TDU7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASC1Q6TDU7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.49■■□□□ 1.67
CASC1Q6TDU7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CASC1Q6TDU7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms