Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.33■■□□□ 1
CASC4Q6P4E1 AL049796.1-201ENST00000565336 1766 ntBASIC21.33■■□□□ 1
CASC4Q6P4E1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CASC4Q6P4E1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.32■■□□□ 1
CASC4Q6P4E1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.32■■□□□ 1
CASC4Q6P4E1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.32■■□□□ 1
CASC4Q6P4E1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CASC4Q6P4E1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.32■■□□□ 1
CASC4Q6P4E1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.31■■□□□ 1
CASC4Q6P4E1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CASC4Q6P4E1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.31■■□□□ 1
CASC4Q6P4E1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.31■■□□□ 1
CASC4Q6P4E1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.31■■□□□ 1
CASC4Q6P4E1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.31■■□□□ 1
CASC4Q6P4E1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.31■■□□□ 1
CASC4Q6P4E1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
CASC4Q6P4E1 AC110285.6-201ENST00000617652 491 ntBASIC21.31■■□□□ 1
CASC4Q6P4E1 AL355001.2-201ENST00000620617 1191 ntBASIC21.31■■□□□ 1
CASC4Q6P4E1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.31■■□□□ 1
CASC4Q6P4E1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CASC4Q6P4E1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.31■■□□□ 1
CASC4Q6P4E1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.31■■□□□ 1
CASC4Q6P4E1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
CASC4Q6P4E1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.3■■□□□ 1
CASC4Q6P4E1 AF213884.3-201ENST00000563833 479 ntBASIC21.3■■□□□ 1
CASC4Q6P4E1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CASC4Q6P4E1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CASC4Q6P4E1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.3■■□□□ 1
CASC4Q6P4E1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.3■■□□□ 1
CASC4Q6P4E1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CASC4Q6P4E1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.29■■□□□ 1
CASC4Q6P4E1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.29■■□□□ 1
CASC4Q6P4E1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CASC4Q6P4E1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.29■■□□□ 1
CASC4Q6P4E1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.29■■□□□ 1
CASC4Q6P4E1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.29■■□□□ 1
CASC4Q6P4E1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.28■■□□□ 1
CASC4Q6P4E1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.28■■□□□ 1
CASC4Q6P4E1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CASC4Q6P4E1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CASC4Q6P4E1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
CASC4Q6P4E1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.28■■□□□ 1
CASC4Q6P4E1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 RASA4CP-201ENST00000424092 1398 ntBASIC21.28■■□□□ 1
CASC4Q6P4E1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CASC4Q6P4E1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.28■■□□□ 1
CASC4Q6P4E1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.28■■□□□ 1
CASC4Q6P4E1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.28■■□□□ 1
CASC4Q6P4E1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CASC4Q6P4E1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms