Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHROOM1Q2M3G4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.62■■□□□ 1.53
SHROOM1Q2M3G4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 POU5F1P3-201ENST00000428824 1078 ntBASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHROOM1Q2M3G4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 DUSP5P2-201ENST00000426873 1033 ntBASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 FAM201B-201ENST00000458407 597 ntBASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 AC091874.3-201ENST00000512672 1195 ntBASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 KRT17P1-201ENST00000399211 1546 ntBASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SHROOM1Q2M3G4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
SHROOM1Q2M3G4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 AL162412.1-201ENST00000567129 965 ntBASIC24.58■■□□□ 1.53
SHROOM1Q2M3G4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
SHROOM1Q2M3G4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
SHROOM1Q2M3G4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.58■■□□□ 1.52
SHROOM1Q2M3G4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 PRORSD1P-201ENST00000295112 541 ntBASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC24.57■■□□□ 1.52
SHROOM1Q2M3G4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
SHROOM1Q2M3G4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SHROOM1Q2M3G4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms