Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.9■□□□□ 0.46
EFNB3Q15768 GUSBP5-202ENST00000510805 1989 ntBASIC17.9■□□□□ 0.46
EFNB3Q15768 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
EFNB3Q15768 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 AL355802.2-201ENST00000402069 882 ntBASIC17.9■□□□□ 0.46
EFNB3Q15768 CYP2T1P-201ENST00000432607 1285 ntBASIC17.9■□□□□ 0.46
EFNB3Q15768 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.9■□□□□ 0.46
EFNB3Q15768 AC142086.2-201ENST00000569753 217 ntBASIC17.9■□□□□ 0.46
EFNB3Q15768 OR10C1-204ENST00000622521 1039 ntBASIC17.9■□□□□ 0.46
EFNB3Q15768 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EFNB3Q15768 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.9■□□□□ 0.46
EFNB3Q15768 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.9■□□□□ 0.46
EFNB3Q15768 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFNB3Q15768 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFNB3Q15768 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFNB3Q15768 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
EFNB3Q15768 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EFNB3Q15768 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 SLC29A4P1-201ENST00000398760 971 ntBASIC17.89■□□□□ 0.45
EFNB3Q15768 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.89■□□□□ 0.45
EFNB3Q15768 GUSBP6-202ENST00000438529 1198 ntBASIC17.89■□□□□ 0.45
EFNB3Q15768 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.89■□□□□ 0.45
EFNB3Q15768 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.89■□□□□ 0.45
EFNB3Q15768 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.89■□□□□ 0.45
EFNB3Q15768 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.89■□□□□ 0.45
EFNB3Q15768 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFNB3Q15768 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.88■□□□□ 0.45
EFNB3Q15768 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.88■□□□□ 0.45
EFNB3Q15768 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EFNB3Q15768 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EFNB3Q15768 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.88■□□□□ 0.45
EFNB3Q15768 AC105036.2-201ENST00000569468 176 ntBASIC17.88■□□□□ 0.45
EFNB3Q15768 AC069236.1-201ENST00000604339 616 ntBASIC17.88■□□□□ 0.45
EFNB3Q15768 AL591742.1-201ENST00000604433 565 ntBASIC17.88■□□□□ 0.45
EFNB3Q15768 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.88■□□□□ 0.45
EFNB3Q15768 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EFNB3Q15768 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFNB3Q15768 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.87■□□□□ 0.45
EFNB3Q15768 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.87■□□□□ 0.45
EFNB3Q15768 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
EFNB3Q15768 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
EFNB3Q15768 AC008694.1-202ENST00000636953 945 ntBASIC17.87■□□□□ 0.45
EFNB3Q15768 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
EFNB3Q15768 ECEL1P1-201ENST00000373592 1742 ntBASIC17.86■□□□□ 0.45
EFNB3Q15768 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EFNB3Q15768 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 AL512625.2-201ENST00000417533 625 ntBASIC17.86■□□□□ 0.45
EFNB3Q15768 AC245052.3-201ENST00000450182 901 ntBASIC17.86■□□□□ 0.45
EFNB3Q15768 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
EFNB3Q15768 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.86■□□□□ 0.45
EFNB3Q15768 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.86■□□□□ 0.45
EFNB3Q15768 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
EFNB3Q15768 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.86■□□□□ 0.45
EFNB3Q15768 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.86■□□□□ 0.45
EFNB3Q15768 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
EFNB3Q15768 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms