Protein–RNA interactions for Protein: Q04121

NHX1, Endosomal/prevacuolar sodium/hydrogen exchanger, yeastyeast

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NHX1Q04121 RPS13YDR064W 456 nt3.92□□□□□ -1.78
NHX1Q04121 YDR524W-CYDR524W-C 90 nt3.92□□□□□ -1.78
NHX1Q04121 GIM4YEL003W 336 nt3.92□□□□□ -1.78
NHX1Q04121 RPL9AYGL147C 576 nt3.92□□□□□ -1.78
NHX1Q04121 FUR1YHR128W 651 nt3.92□□□□□ -1.78
NHX1Q04121 YHR212CYHR212C 336 nt3.92□□□□□ -1.78
NHX1Q04121 YAR060CYAR060C 336 nt3.92□□□□□ -1.78
NHX1Q04121 RRG8YPR116W 834 nt3.92□□□□□ -1.78
NHX1Q04121 FAD1YDL045C 921 nt3.91□□□□□ -1.78
NHX1Q04121 VPS74YDR372C 1038 nt3.91□□□□□ -1.78
NHX1Q04121 SWC4YGR002C 1431 nt3.91□□□□□ -1.78
NHX1Q04121 YHR130CYHR130C 336 nt3.91□□□□□ -1.78
NHX1Q04121 AGE2YIL044C 897 nt3.91□□□□□ -1.78
NHX1Q04121 DPH1YIL103W 1278 nt3.91□□□□□ -1.78
NHX1Q04121 TDA8YAL064C-A 381 nt3.91□□□□□ -1.78
NHX1Q04121 TAF7YMR227C 1773 nt3.91□□□□□ -1.78
NHX1Q04121 NOC2YOR206W 2133 nt3.91□□□□□ -1.78
NHX1Q04121 SHS1YDL225W 1656 nt3.9□□□□□ -1.78
NHX1Q04121 VHS3YOR054C 2025 nt3.9□□□□□ -1.78
NHX1Q04121 GRS2YPR081C 1857 nt3.9□□□□□ -1.78
NHX1Q04121 SPT23YKL020C 3249 nt3.9□□□□□ -1.78
NHX1Q04121 TDA1YMR291W 1761 nt3.9□□□□□ -1.79
NHX1Q04121 YDL032WYDL032W 312 nt3.9□□□□□ -1.79
NHX1Q04121 COX13YGL191W 390 nt3.9□□□□□ -1.79
NHX1Q04121 YGR161W-CYGR161W-C 279 nt3.9□□□□□ -1.79
NHX1Q04121 MTM1YGR257C 1101 nt3.9□□□□□ -1.79
NHX1Q04121 YIR036W-AYIR036W-A 402 nt3.9□□□□□ -1.79
NHX1Q04121 ENV10YLR065C 546 nt3.9□□□□□ -1.79
NHX1Q04121 IMP1YMR150C 573 nt3.9□□□□□ -1.79
NHX1Q04121 YNL046WYNL046W 519 nt3.9□□□□□ -1.79
NHX1Q04121 YNL089CYNL089C 477 nt3.9□□□□□ -1.79
NHX1Q04121 IGO1YNL157W 507 nt3.9□□□□□ -1.79
NHX1Q04121 ASI2YNL159C 870 nt3.9□□□□□ -1.79
NHX1Q04121 YBR103C-AYBR103C-A 144 nt3.9□□□□□ -1.79
NHX1Q04121 DER1YBR201W 636 nt3.9□□□□□ -1.79
NHX1Q04121 NCS2YNL119W 1482 nt3.9□□□□□ -1.79
NHX1Q04121 USA1YML029W 2517 nt3.9□□□□□ -1.79
NHX1Q04121 PSY4YBL046W 1326 nt3.9□□□□□ -1.79
NHX1Q04121 BIK1YCL029C 1323 nt3.9□□□□□ -1.79
NHX1Q04121 STI1YOR027W 1770 nt3.89□□□□□ -1.79
NHX1Q04121 snR59snR59 78 nt3.89□□□□□ -1.79
NHX1Q04121 ARF1YDL192W 546 nt3.89□□□□□ -1.79
NHX1Q04121 PUG1YER185W 912 nt3.89□□□□□ -1.79
NHX1Q04121 MRM2YGL136C 963 nt3.89□□□□□ -1.79
NHX1Q04121 RPL11BYGR085C 525 nt3.89□□□□□ -1.79
NHX1Q04121 PXR1YGR280C 816 nt3.89□□□□□ -1.79
NHX1Q04121 PAU13YHL046C 363 nt3.89□□□□□ -1.79
NHX1Q04121 YHL046W-AYHL046W-A 327 nt3.89□□□□□ -1.79
NHX1Q04121 YIR020CYIR020C 303 nt3.89□□□□□ -1.79
NHX1Q04121 YKL063CYKL063C 504 nt3.89□□□□□ -1.79
NHX1Q04121 YLR171WYLR171W 390 nt3.89□□□□□ -1.79
NHX1Q04121 RPS16AYMR143W 432 nt3.89□□□□□ -1.79
NHX1Q04121 YMR173W-AYMR173W-A 1185 nt3.89□□□□□ -1.79
NHX1Q04121 YOL114CYOL114C 609 nt3.89□□□□□ -1.79
NHX1Q04121 RPL11AYPR102C 525 nt3.89□□□□□ -1.79
NHX1Q04121 TGL3YMR313C 1929 nt3.89□□□□□ -1.79
NHX1Q04121 VMA1YDL185W 3216 nt3.89□□□□□ -1.79
NHX1Q04121 FUN12YAL035W 3009 nt3.89□□□□□ -1.79
NHX1Q04121 TAF6YGL112C 1551 nt3.89□□□□□ -1.79
NHX1Q04121 AVT5YBL089W 1380 nt3.89□□□□□ -1.79
NHX1Q04121 RNT1YMR239C 1416 nt3.88□□□□□ -1.79
NHX1Q04121 ULS1YOR191W 4860 nt3.88□□□□□ -1.79
NHX1Q04121 ARP4YJL081C 1470 nt3.88□□□□□ -1.79
NHX1Q04121 PPH3YDR075W 927 nt3.88□□□□□ -1.79
NHX1Q04121 SPT2YER161C 1002 nt3.88□□□□□ -1.79
NHX1Q04121 MIC19YFR011C 513 nt3.88□□□□□ -1.79
NHX1Q04121 POG1YIL122W 1056 nt3.88□□□□□ -1.79
NHX1Q04121 SOP4YJL192C 705 nt3.88□□□□□ -1.79
NHX1Q04121 UTP11YKL099C 753 nt3.88□□□□□ -1.79
NHX1Q04121 YKL162C-AYKL162C-A 153 nt3.88□□□□□ -1.79
NHX1Q04121 ARG80YMR042W 534 nt3.88□□□□□ -1.79
NHX1Q04121 YMR052C-AYMR052C-A 366 nt3.88□□□□□ -1.79
NHX1Q04121 AIM36YMR157C 768 nt3.88□□□□□ -1.79
NHX1Q04121 MPD2YOL088C 834 nt3.88□□□□□ -1.79
NHX1Q04121 SMI1YGR229C 1518 nt3.88□□□□□ -1.79
NHX1Q04121 UBP16YPL072W 1500 nt3.88□□□□□ -1.79
NHX1Q04121 SNF2YOR290C 5112 nt3.88□□□□□ -1.79
NHX1Q04121 IMD4YML056C 1575 nt3.88□□□□□ -1.79
NHX1Q04121 MTC4YBR255W 2085 nt3.88□□□□□ -1.79
NHX1Q04121 VAC14YLR386W 2643 nt3.88□□□□□ -1.79
NHX1Q04121 SHE4YOR035C 2370 nt3.88□□□□□ -1.79
NHX1Q04121 VPS30YPL120W 1674 nt3.87□□□□□ -1.79
NHX1Q04121 APL4YPR029C 2499 nt3.87□□□□□ -1.79
NHX1Q04121 POL4YCR014C 1749 nt3.87□□□□□ -1.79
NHX1Q04121 SRP68YPL243W 1800 nt3.87□□□□□ -1.79
NHX1Q04121 YDR114CYDR114C 303 nt3.87□□□□□ -1.79
NHX1Q04121 YAP6YDR259C 1152 nt3.87□□□□□ -1.79
NHX1Q04121 FMP10YER182W 735 nt3.87□□□□□ -1.79
NHX1Q04121 COX2Q0250 756 nt3.87□□□□□ -1.79
NHX1Q04121 IGO2YHR132W-A 396 nt3.87□□□□□ -1.79
NHX1Q04121 YLR224WYLR224W 1110 nt3.87□□□□□ -1.79
NHX1Q04121 ARC18YLR370C 537 nt3.87□□□□□ -1.79
NHX1Q04121 LDS2YOL047C 1071 nt3.87□□□□□ -1.79
NHX1Q04121 FYV12YOR183W 390 nt3.87□□□□□ -1.79
NHX1Q04121 YPL261CYPL261C 309 nt3.87□□□□□ -1.79
NHX1Q04121 LTP1YPR073C 486 nt3.87□□□□□ -1.79
NHX1Q04121 YBR141W-AYBR141W-A 96 nt3.87□□□□□ -1.79
NHX1Q04121 ARG5,6YER069W 2592 nt3.86□□□□□ -1.79
NHX1Q04121 FMN1YDR236C 657 nt3.86□□□□□ -1.79
NHX1Q04121 GRX2YDR513W 432 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms