Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 PEX30YLR324W 1572 nt4.54□□□□□ -1.68
UBP3Q01477 RPL8AYHL033C 771 nt4.54□□□□□ -1.68 RIP-Chip
UBP3Q01477 SDO1YLR022C 753 nt4.54□□□□□ -1.68
UBP3Q01477 YLR224WYLR224W 1110 nt4.54□□□□□ -1.68
UBP3Q01477 YML031C-AYML031C-A 336 nt4.54□□□□□ -1.68
UBP3Q01477 YPL038W-AYPL038W-A 192 nt4.54□□□□□ -1.68
UBP3Q01477 YBR076C-AYBR076C-A 267 nt4.54□□□□□ -1.68
UBP3Q01477 YMR018WYMR018W 1545 nt4.54□□□□□ -1.68
UBP3Q01477 YBP2YGL060W 1926 nt4.54□□□□□ -1.68
UBP3Q01477 MUD2YKL074C 1584 nt4.53□□□□□ -1.68
UBP3Q01477 OLE1YGL055W 1533 nt4.53□□□□□ -1.68
UBP3Q01477 ALG8YOR067C 1734 nt4.53□□□□□ -1.68
UBP3Q01477 SWF1YDR126W 1011 nt4.53□□□□□ -1.68
UBP3Q01477 HOM2YDR158W 1098 nt4.53□□□□□ -1.68 RIP-Chip
UBP3Q01477 YER135CYER135C 393 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)CtQ(UUG)C 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)D1tQ(UUG)D1 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)D2tQ(UUG)D2 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)D3tQ(UUG)D3 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)E1tQ(UUG)E1 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)HtQ(UUG)H 72 nt4.53□□□□□ -1.68
UBP3Q01477 tQ(UUG)LtQ(UUG)L 72 nt4.53□□□□□ -1.68
UBP3Q01477 NNT1YLR285W 786 nt4.53□□□□□ -1.68
UBP3Q01477 YNL089CYNL089C 477 nt4.53□□□□□ -1.68
UBP3Q01477 ASI2YNL159C 870 nt4.53□□□□□ -1.68
UBP3Q01477 LDS2YOL047C 1071 nt4.53□□□□□ -1.68
UBP3Q01477 SFM1YOR021C 642 nt4.53□□□□□ -1.68
UBP3Q01477 YOR231C-AYOR231C-A 201 nt4.53□□□□□ -1.68
UBP3Q01477 TPK2YPL203W 1143 nt4.53□□□□□ -1.68
UBP3Q01477 YPR050CYPR050C 414 nt4.53□□□□□ -1.68
UBP3Q01477 DIP2YLR129W 2832 nt4.52□□□□□ -1.69
UBP3Q01477 MTR10YOR160W 2919 nt4.52□□□□□ -1.69
UBP3Q01477 YCR022CYCR022C 345 nt4.52□□□□□ -1.69
UBP3Q01477 YDL240C-AYDL240C-A 138 nt4.52□□□□□ -1.69
UBP3Q01477 MFA1YDR461W 111 nt4.52□□□□□ -1.69
UBP3Q01477 RPL17BYJL177W 555 nt4.52□□□□□ -1.69 RIP-Chip
UBP3Q01477 RDN5-1RDN5-1 121 nt4.52□□□□□ -1.69
UBP3Q01477 PBA1YLR199C 831 nt4.52□□□□□ -1.69
UBP3Q01477 RDN5-6RDN5-6 121 nt4.52□□□□□ -1.69
UBP3Q01477 YBR285WYBR285W 435 nt4.52□□□□□ -1.69
UBP3Q01477 BRE4YDL231C 3378 nt4.52□□□□□ -1.69
UBP3Q01477 FAR8YMR029C 1572 nt4.52□□□□□ -1.69
UBP3Q01477 VPS33YLR396C 2076 nt4.52□□□□□ -1.69
UBP3Q01477 KIP3YGL216W 2418 nt4.51□□□□□ -1.69
UBP3Q01477 SKO1YNL167C 1944 nt4.51□□□□□ -1.69
UBP3Q01477 GPI19YDR437W 423 nt4.51□□□□□ -1.69
UBP3Q01477 API2YDR525W 330 nt4.51□□□□□ -1.69
UBP3Q01477 SPT2YER161C 1002 nt4.51□□□□□ -1.69
UBP3Q01477 COX18YGR062C 951 nt4.51□□□□□ -1.69
UBP3Q01477 ISA1YLL027W 753 nt4.51□□□□□ -1.69
UBP3Q01477 CTK3YML112W 891 nt4.51□□□□□ -1.69 RIP-Chip
UBP3Q01477 SUI1YNL244C 327 nt4.51□□□□□ -1.69
UBP3Q01477 YNL276CYNL276C 396 nt4.51□□□□□ -1.69
UBP3Q01477 IMD4YML056C 1575 nt4.51□□□□□ -1.69
UBP3Q01477 YKR078WYKR078W 1758 nt4.5□□□□□ -1.69
UBP3Q01477 BIK1YCL029C 1323 nt4.5□□□□□ -1.69
UBP3Q01477 ASI3YNL008C 2031 nt4.5□□□□□ -1.69
UBP3Q01477 EXO70YJL085W 1872 nt4.5□□□□□ -1.69 RIP-Chip
UBP3Q01477 YER034WYER034W 558 nt4.5□□□□□ -1.69
UBP3Q01477 YAP3YHL009C 993 nt4.5□□□□□ -1.69
UBP3Q01477 YOR225WYOR225W 330 nt4.5□□□□□ -1.69
UBP3Q01477 FYV5YCL058C 459 nt4.5□□□□□ -1.69
UBP3Q01477 PEP5YMR231W 3090 nt4.5□□□□□ -1.69
UBP3Q01477 FRE4YNR060W 2160 nt4.5□□□□□ -1.69
UBP3Q01477 CHL1YPL008W 2586 nt4.5□□□□□ -1.69
UBP3Q01477 AVT7YIL088C 1473 nt4.49□□□□□ -1.69 RIP-Chip
UBP3Q01477 NUG1YER006W 1563 nt4.49□□□□□ -1.69
UBP3Q01477 HOS3YPL116W 2094 nt4.49□□□□□ -1.69 RIP-Chip
UBP3Q01477 THI13YDL244W 1023 nt4.49□□□□□ -1.69 RIP-Chip
UBP3Q01477 OTU1YFL044C 906 nt4.49□□□□□ -1.69
UBP3Q01477 YIL014C-AYIL014C-A 315 nt4.49□□□□□ -1.69
UBP3Q01477 EFB1YAL003W 621 nt4.49□□□□□ -1.69 RIP-Chip
UBP3Q01477 HIT1YJR055W 495 nt4.49□□□□□ -1.69
UBP3Q01477 AIM29YKR074W 468 nt4.49□□□□□ -1.69
UBP3Q01477 YBR201C-AYBR201C-A 204 nt4.49□□□□□ -1.69
UBP3Q01477 FUN12YAL035W 3009 nt4.49□□□□□ -1.69 RIP-Chip
UBP3Q01477 YSH1YLR277C 2340 nt4.49□□□□□ -1.69
UBP3Q01477 FYV4YHR059W 393 nt4.48□□□□□ -1.69
UBP3Q01477 YIL171WYIL171W 330 nt4.48□□□□□ -1.69
UBP3Q01477 YKL044WYKL044W 321 nt4.48□□□□□ -1.69
UBP3Q01477 TIF11YMR260C 462 nt4.48□□□□□ -1.69 RIP-Chip
UBP3Q01477 PEP12YOR036W 867 nt4.48□□□□□ -1.69 RIP-Chip
UBP3Q01477 snR54snR54 86 nt4.48□□□□□ -1.69
UBP3Q01477 PPN1YDR452W 2025 nt4.48□□□□□ -1.69
UBP3Q01477 ANR2YKL047W 1551 nt4.48□□□□□ -1.69
UBP3Q01477 VAC7YNL054W 3498 nt4.48□□□□□ -1.69
UBP3Q01477 SLM2YNL047C 1971 nt4.47□□□□□ -1.69 RIP-Chip
UBP3Q01477 Q0032Q0032 291 nt4.47□□□□□ -1.69
UBP3Q01477 BIG1YHR101C 1008 nt4.47□□□□□ -1.69
UBP3Q01477 YIR020CYIR020C 303 nt4.47□□□□□ -1.69
UBP3Q01477 RPA12YJR063W 378 nt4.47□□□□□ -1.69
UBP3Q01477 YKL066WYKL066W 444 nt4.47□□□□□ -1.69
UBP3Q01477 YKL070WYKL070W 510 nt4.47□□□□□ -1.69
UBP3Q01477 YBL028CYBL028C 321 nt4.47□□□□□ -1.69
UBP3Q01477 DER1YBR201W 636 nt4.47□□□□□ -1.69
UBP3Q01477 ADY4YLR227C 1482 nt4.47□□□□□ -1.69
UBP3Q01477 VID28YIL017C 2766 nt4.46□□□□□ -1.7
UBP3Q01477 EXO5YBR163W 1758 nt4.46□□□□□ -1.7
UBP3Q01477 SSL1YLR005W 1386 nt4.46□□□□□ -1.7
UBP3Q01477 YEL075CYEL075C 369 nt4.46□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 1115.6 ms