Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 AC073508.3-201ENST00000619697 1419 ntBASIC13.2□□□□□ -0.3
HSPG2P98160 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.2□□□□□ -0.3
HSPG2P98160 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.2□□□□□ -0.3
HSPG2P98160 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HSPG2P98160 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.19□□□□□ -0.3
HSPG2P98160 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.19□□□□□ -0.3
HSPG2P98160 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.19□□□□□ -0.3
HSPG2P98160 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.19□□□□□ -0.3
HSPG2P98160 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HSPG2P98160 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
HSPG2P98160 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HSPG2P98160 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.18□□□□□ -0.3
HSPG2P98160 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.18□□□□□ -0.3
HSPG2P98160 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.18□□□□□ -0.3
HSPG2P98160 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.18□□□□□ -0.3
HSPG2P98160 NTF6B-201ENST00000591913 560 ntBASIC13.18□□□□□ -0.3
HSPG2P98160 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 AC133681.1-201ENST00000465482 601 ntBASIC13.18□□□□□ -0.3
HSPG2P98160 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HSPG2P98160 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HSPG2P98160 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.18□□□□□ -0.3
HSPG2P98160 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HSPG2P98160 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 THRA-202ENST00000394121 2260 ntTSL 2 BASIC13.17□□□□□ -0.3
HSPG2P98160 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.17□□□□□ -0.3
HSPG2P98160 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.17□□□□□ -0.3
HSPG2P98160 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.17□□□□□ -0.3
HSPG2P98160 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
HSPG2P98160 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 AC087633.2-202ENST00000565166 1439 ntBASIC13.17□□□□□ -0.3
HSPG2P98160 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HSPG2P98160 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HSPG2P98160 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HSPG2P98160 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC13.17□□□□□ -0.3
HSPG2P98160 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.17□□□□□ -0.3
HSPG2P98160 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.17□□□□□ -0.3
HSPG2P98160 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.17□□□□□ -0.3
HSPG2P98160 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HSPG2P98160 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC13.17□□□□□ -0.3
HSPG2P98160 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.17□□□□□ -0.3
HSPG2P98160 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC13.17□□□□□ -0.3
HSPG2P98160 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.16□□□□□ -0.3
HSPG2P98160 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.16□□□□□ -0.3
HSPG2P98160 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HSPG2P98160 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.16□□□□□ -0.3
HSPG2P98160 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HSPG2P98160 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.16□□□□□ -0.3
HSPG2P98160 AP003071.4-201ENST00000562276 1284 ntBASIC13.16□□□□□ -0.3
HSPG2P98160 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HSPG2P98160 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
HSPG2P98160 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.16□□□□□ -0.3
HSPG2P98160 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms