Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.68■□□□□ 0.9
SRP54P61011 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.68■□□□□ 0.9
SRP54P61011 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.68■□□□□ 0.9
SRP54P61011 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SRP54P61011 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRP54P61011 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SRP54P61011 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.68■□□□□ 0.9
SRP54P61011 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.68■□□□□ 0.9
SRP54P61011 RBM17P2-201ENST00000616397 1405 ntBASIC20.68■□□□□ 0.9
SRP54P61011 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.68■□□□□ 0.9
SRP54P61011 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.68■□□□□ 0.9
SRP54P61011 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.68■□□□□ 0.9
SRP54P61011 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.67■□□□□ 0.9
SRP54P61011 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.67■□□□□ 0.9
SRP54P61011 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.67■□□□□ 0.9
SRP54P61011 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.67■□□□□ 0.9
SRP54P61011 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.67■□□□□ 0.9
SRP54P61011 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.67■□□□□ 0.9
SRP54P61011 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SRP54P61011 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.67■□□□□ 0.9
SRP54P61011 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.66■□□□□ 0.9
SRP54P61011 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.66■□□□□ 0.9
SRP54P61011 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRP54P61011 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SRP54P61011 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SRP54P61011 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SRP54P61011 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SRP54P61011 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.66■□□□□ 0.9
SRP54P61011 AL138781.1-201ENST00000566567 1274 ntBASIC20.66■□□□□ 0.9
SRP54P61011 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.66■□□□□ 0.9
SRP54P61011 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
SRP54P61011 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.66■□□□□ 0.9
SRP54P61011 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRP54P61011 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRP54P61011 AC242852.2-201ENST00000615738 1807 ntBASIC20.66■□□□□ 0.9
SRP54P61011 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SRP54P61011 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SRP54P61011 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.65■□□□□ 0.9
SRP54P61011 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SRP54P61011 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
SRP54P61011 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.65■□□□□ 0.9
SRP54P61011 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.65■□□□□ 0.9
SRP54P61011 AC243732.1-201ENST00000612648 864 ntBASIC20.65■□□□□ 0.9
SRP54P61011 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.65■□□□□ 0.9
SRP54P61011 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.65■□□□□ 0.9
SRP54P61011 AC008694.1-202ENST00000636953 945 ntBASIC20.65■□□□□ 0.9
SRP54P61011 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SRP54P61011 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.65■□□□□ 0.9
SRP54P61011 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SRP54P61011 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRP54P61011 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.64■□□□□ 0.9
SRP54P61011 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SRP54P61011 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRP54P61011 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.64■□□□□ 0.89
SRP54P61011 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRP54P61011 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.64■□□□□ 0.89
SRP54P61011 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRP54P61011 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.64■□□□□ 0.89
SRP54P61011 AC069236.1-201ENST00000604339 616 ntBASIC20.64■□□□□ 0.89
SRP54P61011 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.64■□□□□ 0.89
SRP54P61011 OR10C1-204ENST00000622521 1039 ntBASIC20.64■□□□□ 0.89
SRP54P61011 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.64■□□□□ 0.89
SRP54P61011 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SRP54P61011 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.64■□□□□ 0.89
SRP54P61011 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SRP54P61011 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SRP54P61011 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.64■□□□□ 0.89
SRP54P61011 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
SRP54P61011 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRP54P61011 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SRP54P61011 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.63■□□□□ 0.89
SRP54P61011 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.63■□□□□ 0.89
SRP54P61011 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.63■□□□□ 0.89
SRP54P61011 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.63■□□□□ 0.89
SRP54P61011 AL591742.1-201ENST00000604433 565 ntBASIC20.63■□□□□ 0.89
SRP54P61011 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.63■□□□□ 0.89
SRP54P61011 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SRP54P61011 AC233723.2-201ENST00000623798 2106 ntBASIC20.63■□□□□ 0.89
SRP54P61011 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SRP54P61011 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP54P61011 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP54P61011 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP54P61011 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP54P61011 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SRP54P61011 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SRP54P61011 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms