Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN18P56856 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN18P56856 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 AC068338.2-201ENST00000563278 1430 ntBASIC18.79■□□□□ 0.6
CLDN18P56856 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN18P56856 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN18P56856 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN18P56856 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLDN18P56856 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN18P56856 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN18P56856 AC104771.1-201ENST00000603335 964 ntBASIC18.78■□□□□ 0.6
CLDN18P56856 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.78■□□□□ 0.6
CLDN18P56856 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN18P56856 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN18P56856 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLDN18P56856 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN18P56856 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN18P56856 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN18P56856 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN18P56856 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN18P56856 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN18P56856 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN18P56856 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN18P56856 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN18P56856 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN18P56856 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLDN18P56856 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CLDN18P56856 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN18P56856 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLDN18P56856 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN18P56856 GPX1P1-201ENST00000388829 606 ntBASIC18.76■□□□□ 0.59
CLDN18P56856 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.76■□□□□ 0.59
CLDN18P56856 CYP2T1P-201ENST00000432607 1285 ntBASIC18.76■□□□□ 0.59
CLDN18P56856 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN18P56856 AL121832.2-201ENST00000610979 668 ntBASIC18.76■□□□□ 0.59
CLDN18P56856 AL109923.1-201ENST00000618799 583 ntBASIC18.76■□□□□ 0.59
CLDN18P56856 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN18P56856 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
CLDN18P56856 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN18P56856 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN18P56856 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 AC083906.2-201ENST00000511578 360 ntBASIC18.75■□□□□ 0.59
CLDN18P56856 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN18P56856 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN18P56856 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN18P56856 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN18P56856 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.75■□□□□ 0.59
CLDN18P56856 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CLDN18P56856 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLDN18P56856 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN18P56856 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
CLDN18P56856 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 AC245052.3-201ENST00000450182 901 ntBASIC18.74■□□□□ 0.59
CLDN18P56856 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN18P56856 AC133552.2-202ENST00000575694 574 ntBASIC18.74■□□□□ 0.59
CLDN18P56856 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN18P56856 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLDN18P56856 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN18P56856 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLDN18P56856 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN18P56856 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN18P56856 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms