Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.19■□□□□ 0.82
CLDN6P56747 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.19■□□□□ 0.82
CLDN6P56747 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.19■□□□□ 0.82
CLDN6P56747 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN6P56747 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN6P56747 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLDN6P56747 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLDN6P56747 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CLDN6P56747 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.18■□□□□ 0.82
CLDN6P56747 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.18■□□□□ 0.82
CLDN6P56747 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN6P56747 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.18■□□□□ 0.82
CLDN6P56747 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLDN6P56747 KRT16P2-201ENST00000414673 1423 ntBASIC20.18■□□□□ 0.82
CLDN6P56747 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CLDN6P56747 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN6P56747 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
CLDN6P56747 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN6P56747 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.17■□□□□ 0.82
CLDN6P56747 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.17■□□□□ 0.82
CLDN6P56747 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN6P56747 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLDN6P56747 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.17■□□□□ 0.82
CLDN6P56747 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLDN6P56747 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CLDN6P56747 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
CLDN6P56747 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CLDN6P56747 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.17■□□□□ 0.82
CLDN6P56747 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN6P56747 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN6P56747 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN6P56747 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN6P56747 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.16■□□□□ 0.82
CLDN6P56747 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.16■□□□□ 0.82
CLDN6P56747 AL162412.1-201ENST00000567129 965 ntBASIC20.16■□□□□ 0.82
CLDN6P56747 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN6P56747 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLDN6P56747 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.16■□□□□ 0.82
CLDN6P56747 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.16■□□□□ 0.82
CLDN6P56747 AC087742.1-201ENST00000575880 1738 ntBASIC20.16■□□□□ 0.82
CLDN6P56747 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLDN6P56747 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
CLDN6P56747 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 ECEL1P3-201ENST00000427961 737 ntBASIC20.15■□□□□ 0.82
CLDN6P56747 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CLDN6P56747 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN6P56747 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN6P56747 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.15■□□□□ 0.82
CLDN6P56747 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.15■□□□□ 0.82
CLDN6P56747 AC233263.1-201ENST00000578059 224 ntBASIC20.15■□□□□ 0.82
CLDN6P56747 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN6P56747 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN6P56747 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CLDN6P56747 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.15■□□□□ 0.82
CLDN6P56747 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.15■□□□□ 0.82
CLDN6P56747 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLDN6P56747 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CLDN6P56747 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLDN6P56747 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.14■□□□□ 0.81
CLDN6P56747 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 C1QBPP2-201ENST00000528754 825 ntBASIC20.14■□□□□ 0.81
CLDN6P56747 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.14■□□□□ 0.81
CLDN6P56747 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
CLDN6P56747 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLDN6P56747 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
CLDN6P56747 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN6P56747 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CLDN6P56747 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN6P56747 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.13■□□□□ 0.81
CLDN6P56747 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLDN6P56747 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms