Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.2■□□□□ 0.98
WNT3AP56704 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.2■□□□□ 0.98
WNT3AP56704 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.2■□□□□ 0.98
WNT3AP56704 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.2■□□□□ 0.98
WNT3AP56704 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.2■□□□□ 0.98
WNT3AP56704 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 AL049796.1-201ENST00000565336 1766 ntBASIC21.2■□□□□ 0.98
WNT3AP56704 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.2■□□□□ 0.98
WNT3AP56704 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
WNT3AP56704 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.19■□□□□ 0.98
WNT3AP56704 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3AP56704 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.19■□□□□ 0.98
WNT3AP56704 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3AP56704 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.19■□□□□ 0.98
WNT3AP56704 KRT18P61-201ENST00000585825 1298 ntBASIC21.19■□□□□ 0.98
WNT3AP56704 AC008175.2-201ENST00000612840 297 ntBASIC21.19■□□□□ 0.98
WNT3AP56704 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3AP56704 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
WNT3AP56704 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.19■□□□□ 0.98
WNT3AP56704 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
WNT3AP56704 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 POU5F1P4-201ENST00000413175 1085 ntBASIC21.18■□□□□ 0.98
WNT3AP56704 AP001160.3-201ENST00000601484 763 ntBASIC21.18■□□□□ 0.98
WNT3AP56704 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.18■□□□□ 0.98
WNT3AP56704 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
WNT3AP56704 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.17■□□□□ 0.98
WNT3AP56704 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
WNT3AP56704 AC026271.2-201ENST00000428091 497 ntBASIC21.17■□□□□ 0.98
WNT3AP56704 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 AC034268.1-201ENST00000441047 882 ntBASIC21.17■□□□□ 0.98
WNT3AP56704 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.17■□□□□ 0.98
WNT3AP56704 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.17■□□□□ 0.98
WNT3AP56704 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
WNT3AP56704 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
WNT3AP56704 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
WNT3AP56704 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.17■□□□□ 0.98
WNT3AP56704 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
WNT3AP56704 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.16■□□□□ 0.98
WNT3AP56704 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.16■□□□□ 0.98
WNT3AP56704 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
WNT3AP56704 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.16■□□□□ 0.98
WNT3AP56704 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.16■□□□□ 0.98
WNT3AP56704 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
WNT3AP56704 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.16■□□□□ 0.98
WNT3AP56704 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
WNT3AP56704 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
WNT3AP56704 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
WNT3AP56704 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.15■□□□□ 0.98
WNT3AP56704 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
WNT3AP56704 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.15■□□□□ 0.98
WNT3AP56704 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
WNT3AP56704 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.15■□□□□ 0.98
WNT3AP56704 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.15■□□□□ 0.98
WNT3AP56704 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
WNT3AP56704 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
WNT3AP56704 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
WNT3AP56704 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
WNT3AP56704 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.14■□□□□ 0.98
WNT3AP56704 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
WNT3AP56704 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
WNT3AP56704 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
WNT3AP56704 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
WNT3AP56704 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
WNT3AP56704 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.14■□□□□ 0.97
WNT3AP56704 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.14■□□□□ 0.97
WNT3AP56704 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.14■□□□□ 0.97
WNT3AP56704 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
WNT3AP56704 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.14■□□□□ 0.97
WNT3AP56704 RARRES2P6-201ENST00000567333 442 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms