Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
CDH6P55285 AC019069.1-201ENST00000610008 1333 ntBASIC21.79■■□□□ 1.08
CDH6P55285 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH6P55285 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH6P55285 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH6P55285 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH6P55285 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CDH6P55285 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH6P55285 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 KRT87P-202ENST00000534226 1464 ntBASIC21.77■■□□□ 1.08
CDH6P55285 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDH6P55285 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDH6P55285 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH6P55285 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDH6P55285 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 AC123595.1-201ENST00000440769 1046 ntBASIC21.76■■□□□ 1.07
CDH6P55285 YBX1P1-201ENST00000445822 960 ntBASIC21.76■■□□□ 1.07
CDH6P55285 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CDH6P55285 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH6P55285 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.76■■□□□ 1.07
CDH6P55285 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CDH6P55285 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH6P55285 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH6P55285 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CDH6P55285 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH6P55285 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH6P55285 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH6P55285 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH6P55285 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.74■■□□□ 1.07
CDH6P55285 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDH6P55285 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH6P55285 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 AC061975.6-201ENST00000579045 1553 ntBASIC21.74■■□□□ 1.07
CDH6P55285 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH6P55285 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH6P55285 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.73■■□□□ 1.07
CDH6P55285 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH6P55285 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CDH6P55285 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH6P55285 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH6P55285 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.73■■□□□ 1.07
CDH6P55285 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH6P55285 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH6P55285 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.73■■□□□ 1.07
CDH6P55285 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
CDH6P55285 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
CDH6P55285 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH6P55285 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.72■■□□□ 1.07
CDH6P55285 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.72■■□□□ 1.07
CDH6P55285 TERF1P2-201ENST00000583350 1212 ntBASIC21.72■■□□□ 1.07
CDH6P55285 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH6P55285 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH6P55285 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDH6P55285 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH6P55285 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms