Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX2P50458 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.79■□□□□ 0.6
LHX2P50458 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 GPX1P1-201ENST00000388829 606 ntBASIC18.79■□□□□ 0.6
LHX2P50458 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX2P50458 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX2P50458 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.79■□□□□ 0.6
LHX2P50458 AC104771.1-201ENST00000603335 964 ntBASIC18.79■□□□□ 0.6
LHX2P50458 AL121832.2-201ENST00000610979 668 ntBASIC18.79■□□□□ 0.6
LHX2P50458 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
LHX2P50458 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LHX2P50458 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LHX2P50458 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LHX2P50458 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.78■□□□□ 0.6
LHX2P50458 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.78■□□□□ 0.6
LHX2P50458 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
LHX2P50458 CYP2T1P-201ENST00000432607 1285 ntBASIC18.78■□□□□ 0.6
LHX2P50458 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.78■□□□□ 0.6
LHX2P50458 AL109923.1-201ENST00000618799 583 ntBASIC18.78■□□□□ 0.6
LHX2P50458 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LHX2P50458 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.78■□□□□ 0.6
LHX2P50458 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
LHX2P50458 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
LHX2P50458 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 AC083906.2-201ENST00000511578 360 ntBASIC18.77■□□□□ 0.6
LHX2P50458 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.77■□□□□ 0.6
LHX2P50458 AC133552.2-202ENST00000575694 574 ntBASIC18.77■□□□□ 0.6
LHX2P50458 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LHX2P50458 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
LHX2P50458 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.77■□□□□ 0.6
LHX2P50458 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
LHX2P50458 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LHX2P50458 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LHX2P50458 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.76■□□□□ 0.59
LHX2P50458 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.76■□□□□ 0.59
LHX2P50458 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.76■□□□□ 0.59
LHX2P50458 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.76■□□□□ 0.59
LHX2P50458 AC245052.3-201ENST00000450182 901 ntBASIC18.76■□□□□ 0.59
LHX2P50458 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.76■□□□□ 0.59
LHX2P50458 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.76■□□□□ 0.59
LHX2P50458 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LHX2P50458 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LHX2P50458 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LHX2P50458 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LHX2P50458 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.75■□□□□ 0.59
LHX2P50458 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LHX2P50458 AL591742.1-201ENST00000604433 565 ntBASIC18.75■□□□□ 0.59
LHX2P50458 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.75■□□□□ 0.59
LHX2P50458 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.75■□□□□ 0.59
LHX2P50458 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LHX2P50458 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LHX2P50458 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX2P50458 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.74■□□□□ 0.59
LHX2P50458 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LHX2P50458 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms