Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CLK3P49761 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.79■□□□□ 0.76
CLK3P49761 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.79■□□□□ 0.76
CLK3P49761 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLK3P49761 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLK3P49761 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLK3P49761 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.79■□□□□ 0.76
CLK3P49761 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.78■□□□□ 0.76
CLK3P49761 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 SMUG1P1-201ENST00000590640 811 ntBASIC19.78■□□□□ 0.76
CLK3P49761 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CLK3P49761 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLK3P49761 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CLK3P49761 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK3P49761 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CLK3P49761 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.77■□□□□ 0.76
CLK3P49761 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.77■□□□□ 0.76
CLK3P49761 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.77■□□□□ 0.76
CLK3P49761 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.77■□□□□ 0.76
CLK3P49761 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.77■□□□□ 0.76
CLK3P49761 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLK3P49761 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.77■□□□□ 0.75
CLK3P49761 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLK3P49761 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.76■□□□□ 0.75
CLK3P49761 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 AC012414.1-201ENST00000556676 535 ntBASIC19.76■□□□□ 0.75
CLK3P49761 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLK3P49761 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.76■□□□□ 0.75
CLK3P49761 AC019069.1-201ENST00000610008 1333 ntBASIC19.76■□□□□ 0.75
CLK3P49761 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.75■□□□□ 0.75
CLK3P49761 AP004607.7-201ENST00000527152 1677 ntBASIC19.75■□□□□ 0.75
CLK3P49761 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.75■□□□□ 0.75
CLK3P49761 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK3P49761 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK3P49761 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLK3P49761 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CLK3P49761 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.75■□□□□ 0.75
CLK3P49761 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK3P49761 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.75■□□□□ 0.75
CLK3P49761 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLK3P49761 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK3P49761 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.75■□□□□ 0.75
CLK3P49761 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLK3P49761 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLK3P49761 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK3P49761 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CLK3P49761 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK3P49761 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLK3P49761 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.74■□□□□ 0.75
CLK3P49761 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.74■□□□□ 0.75
CLK3P49761 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.74■□□□□ 0.75
CLK3P49761 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLK3P49761 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.74■□□□□ 0.75
CLK3P49761 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CLK3P49761 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLK3P49761 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.74■□□□□ 0.75
CLK3P49761 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK3P49761 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK3P49761 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
CLK3P49761 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLK3P49761 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.73■□□□□ 0.75
CLK3P49761 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.73■□□□□ 0.75
CLK3P49761 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLK3P49761 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CLK3P49761 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms