Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 AC104187.1-201ENST00000607510 612 ntBASIC20.26■□□□□ 0.83
SLC6A12P48065 AC008175.2-201ENST00000612840 297 ntBASIC20.26■□□□□ 0.83
SLC6A12P48065 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC6A12P48065 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.26■□□□□ 0.83
SLC6A12P48065 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC6A12P48065 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC6A12P48065 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC6A12P48065 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC6A12P48065 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC6A12P48065 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC6A12P48065 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC6A12P48065 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC6A12P48065 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC6A12P48065 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SLC6A12P48065 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A12P48065 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC6A12P48065 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC6A12P48065 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A12P48065 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC6A12P48065 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC6A12P48065 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
SLC6A12P48065 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SLC6A12P48065 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC6A12P48065 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A12P48065 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC6A12P48065 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A12P48065 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A12P48065 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC6A12P48065 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC6A12P48065 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L2-201ENST00000561772 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC6A12P48065 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC6A12P48065 AC004854.2-201ENST00000608450 1441 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L6-201ENST00000626483 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L1-201ENST00000627662 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L8-201ENST00000629013 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L3-201ENST00000630187 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L7-201ENST00000630678 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 DUX4L5-201ENST00000630834 1275 ntBASIC20.23■□□□□ 0.83
SLC6A12P48065 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SLC6A12P48065 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC6A12P48065 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC6A12P48065 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
SLC6A12P48065 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC6A12P48065 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 KRT16P2-201ENST00000414673 1423 ntBASIC20.22■□□□□ 0.83
SLC6A12P48065 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC6A12P48065 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC6A12P48065 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 KRT18P61-201ENST00000585825 1298 ntBASIC20.22■□□□□ 0.83
SLC6A12P48065 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SLC6A12P48065 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC6A12P48065 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
SLC6A12P48065 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
SLC6A12P48065 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SLC6A12P48065 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
SLC6A12P48065 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC6A12P48065 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC6A12P48065 AP001160.3-201ENST00000601484 763 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms