Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NR4A2P43354 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NR4A2P43354 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
NR4A2P43354 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NR4A2P43354 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
NR4A2P43354 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.88■□□□□ 0.61
NR4A2P43354 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NR4A2P43354 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
NR4A2P43354 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NR4A2P43354 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NR4A2P43354 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
NR4A2P43354 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
NR4A2P43354 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.86■□□□□ 0.61
NR4A2P43354 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NR4A2P43354 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NR4A2P43354 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 AC087623.3-201ENST00000607047 1098 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 pRNA.6-201ENST00000610482 90 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 pRNA.5-201ENST00000612139 90 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 pRNA.11-201ENST00000618423 90 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 pRNA.13-201ENST00000619112 90 ntBASIC18.86■□□□□ 0.61
NR4A2P43354 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NR4A2P43354 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NR4A2P43354 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NR4A2P43354 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
NR4A2P43354 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.85■□□□□ 0.61
NR4A2P43354 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.85■□□□□ 0.61
NR4A2P43354 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.85■□□□□ 0.61
NR4A2P43354 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NR4A2P43354 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NR4A2P43354 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
NR4A2P43354 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NR4A2P43354 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.84■□□□□ 0.61
NR4A2P43354 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NR4A2P43354 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.84■□□□□ 0.61
NR4A2P43354 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.84■□□□□ 0.61
NR4A2P43354 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NR4A2P43354 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NR4A2P43354 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms