Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 RGR1YLR071C 3249 nt2.76□□□□□ -1.97
RTR1P40084 FIN1YDR130C 876 nt2.76□□□□□ -1.97
RTR1P40084 YER066C-AYER066C-A 501 nt2.76□□□□□ -1.97
RTR1P40084 DAD2YKR083C 402 nt2.76□□□□□ -1.97
RTR1P40084 YLR290CYLR290C 834 nt2.76□□□□□ -1.97
RTR1P40084 POL30YBR088C 777 nt2.76□□□□□ -1.97
RTR1P40084 SWD3YBR175W 948 nt2.76□□□□□ -1.97
RTR1P40084 VHR2YER064C 1518 nt2.76□□□□□ -1.97
RTR1P40084 MMS1YPR164W 4224 nt2.76□□□□□ -1.97
RTR1P40084 VPS9YML097C 1356 nt2.75□□□□□ -1.97
RTR1P40084 AI2Q0055 2565 nt2.75□□□□□ -1.97
RTR1P40084 INO80YGL150C 4470 nt2.75□□□□□ -1.97
RTR1P40084 SCL1YGL011C 759 nt2.75□□□□□ -1.97
RTR1P40084 YGR064WYGR064W 369 nt2.75□□□□□ -1.97
RTR1P40084 RPL27AYHR010W 411 nt2.75□□□□□ -1.97
RTR1P40084 PCL7YIL050W 858 nt2.75□□□□□ -1.97
RTR1P40084 MRPL38YKL170W 417 nt2.75□□□□□ -1.97
RTR1P40084 KTI11YBL071W-A 249 nt2.75□□□□□ -1.97
RTR1P40084 IAH1YOR126C 717 nt2.75□□□□□ -1.97
RTR1P40084 PIN3YPR154W 648 nt2.75□□□□□ -1.97
RTR1P40084 YPR203WYPR203W 309 nt2.75□□□□□ -1.97
RTR1P40084 INP53YOR109W 3324 nt2.75□□□□□ -1.97
RTR1P40084 CWC22YGR278W 1734 nt2.74□□□□□ -1.97
RTR1P40084 YDR210W-BYDR210W-B 5313 nt2.74□□□□□ -1.97
RTR1P40084 YDR261W-BYDR261W-B 5313 nt2.74□□□□□ -1.97
RTR1P40084 YFL002W-AYFL002W-A 5313 nt2.74□□□□□ -1.97
RTR1P40084 YGR161W-BYGR161W-B 5313 nt2.74□□□□□ -1.97
RTR1P40084 YLR410W-BYLR410W-B 5313 nt2.74□□□□□ -1.97
RTR1P40084 YCL019WYCL019W 5313 nt2.74□□□□□ -1.97
RTR1P40084 YIL024CYIL024C 570 nt2.74□□□□□ -1.97
RTR1P40084 SNX41YDR425W 1878 nt2.73□□□□□ -1.97
RTR1P40084 UTP14YML093W 2700 nt2.73□□□□□ -1.97
RTR1P40084 snR63snR63 255 nt2.73□□□□□ -1.97
RTR1P40084 NSE3YDR288W 912 nt2.73□□□□□ -1.97
RTR1P40084 BRP1YGL007W 378 nt2.73□□□□□ -1.97
RTR1P40084 YJL052C-AYJL052C-A 120 nt2.73□□□□□ -1.97
RTR1P40084 VMA6YLR447C 1038 nt2.73□□□□□ -1.97
RTR1P40084 YBL081WYBL081W 1107 nt2.73□□□□□ -1.97
RTR1P40084 ATG19YOL082W 1248 nt2.73□□□□□ -1.97
RTR1P40084 JSN1YJR091C 3276 nt2.73□□□□□ -1.97
RTR1P40084 YJR061WYJR061W 2808 nt2.73□□□□□ -1.97
RTR1P40084 SSQ1YLR369W 1974 nt2.72□□□□□ -1.97
RTR1P40084 SSD1YDR293C 3753 nt2.72□□□□□ -1.97
RTR1P40084 SKO1YNL167C 1944 nt2.72□□□□□ -1.97
RTR1P40084 RTT105YER104W 627 nt2.72□□□□□ -1.97
RTR1P40084 SMX2YFL017W-A 234 nt2.72□□□□□ -1.97
RTR1P40084 PRP18YGR006W 756 nt2.72□□□□□ -1.97
RTR1P40084 MRPL6YHR147C 645 nt2.72□□□□□ -1.97
RTR1P40084 MAK11YKL021C 1407 nt2.72□□□□□ -1.97
RTR1P40084 RPS22BYLR367W 393 nt2.72□□□□□ -1.97
RTR1P40084 YNL035CYNL035C 1170 nt2.72□□□□□ -1.97
RTR1P40084 RPS10AYOR293W 318 nt2.72□□□□□ -1.97
RTR1P40084 MRPL27YBR282W 441 nt2.72□□□□□ -1.97
RTR1P40084 YBL005W-BYBL005W-B 5268 nt2.72□□□□□ -1.97
RTR1P40084 SAP185YJL098W 3177 nt2.72□□□□□ -1.97
RTR1P40084 SPH1YLR313C 1593 nt2.71□□□□□ -1.98
RTR1P40084 DCG1YIR030C 735 nt2.71□□□□□ -1.98
RTR1P40084 YNL043CYNL043C 321 nt2.71□□□□□ -1.98
RTR1P40084 JID1YPR061C 906 nt2.71□□□□□ -1.98
RTR1P40084 MRPL9YGR220C 810 nt2.7□□□□□ -1.98
RTR1P40084 RPL17BYJL177W 555 nt2.7□□□□□ -1.98
RTR1P40084 HRT3YLR097C 1035 nt2.7□□□□□ -1.98
RTR1P40084 ARF3YOR094W 552 nt2.7□□□□□ -1.98
RTR1P40084 RBL2YOR265W 321 nt2.7□□□□□ -1.98
RTR1P40084 SKT5YBL061C 2091 nt2.7□□□□□ -1.98
RTR1P40084 ADY4YLR227C 1482 nt2.7□□□□□ -1.98
RTR1P40084 PAF1YBR279W 1338 nt2.69□□□□□ -1.98
RTR1P40084 HRD3YLR207W 2502 nt2.69□□□□□ -1.98
RTR1P40084 RRG1YDR065W 1098 nt2.69□□□□□ -1.98
RTR1P40084 YDR320W-BYDR320W-B 138 nt2.69□□□□□ -1.98
RTR1P40084 DUO1YGL061C 744 nt2.69□□□□□ -1.98
RTR1P40084 TCD1YHR003C 1290 nt2.69□□□□□ -1.98
RTR1P40084 YIL156W-AYIL156W-A 402 nt2.69□□□□□ -1.98
RTR1P40084 YLR400WYLR400W 474 nt2.69□□□□□ -1.98
RTR1P40084 YMR194C-AYMR194C-A 225 nt2.69□□□□□ -1.98
RTR1P40084 ATG34YOL083W 1239 nt2.69□□□□□ -1.98
RTR1P40084 REG2YBR050C 1017 nt2.69□□□□□ -1.98
RTR1P40084 ISU1YPL135W 498 nt2.69□□□□□ -1.98
RTR1P40084 NUF2YOL069W 1356 nt2.69□□□□□ -1.98
RTR1P40084 UFD4YKL010C 4452 nt2.69□□□□□ -1.98
RTR1P40084 TOR1YJR066W 7413 nt2.68□□□□□ -1.98
RTR1P40084 ECM11YDR446W 909 nt2.68□□□□□ -1.98
RTR1P40084 YGR114CYGR114C 390 nt2.68□□□□□ -1.98
RTR1P40084 CIR1YGR207C 786 nt2.68□□□□□ -1.98
RTR1P40084 YAL026C-AYAL026C-A 438 nt2.68□□□□□ -1.98
RTR1P40084 LSM8YJR022W 330 nt2.68□□□□□ -1.98
RTR1P40084 YBL096CYBL096C 309 nt2.68□□□□□ -1.98
RTR1P40084 TRM112YNR046W 408 nt2.68□□□□□ -1.98
RTR1P40084 MF(ALPHA)1YPL187W 498 nt2.68□□□□□ -1.98
RTR1P40084 AFT2YPL202C 1251 nt2.68□□□□□ -1.98
RTR1P40084 YCL023CYCL023C 348 nt2.68□□□□□ -1.98
RTR1P40084 CET1YPL228W 1650 nt2.68□□□□□ -1.98
RTR1P40084 IRC3YDR332W 2070 nt2.68□□□□□ -1.98
RTR1P40084 ATP22YDR350C 2055 nt2.68□□□□□ -1.98
RTR1P40084 SUL1YBR294W 2580 nt2.68□□□□□ -1.98
RTR1P40084 GEA1YJR031C 4227 nt2.67□□□□□ -1.98
RTR1P40084 TSC13YDL015C 933 nt2.67□□□□□ -1.98
RTR1P40084 RPL13AYDL082W 600 nt2.67□□□□□ -1.98
RTR1P40084 RPL35BYDL136W 363 nt2.67□□□□□ -1.98
RTR1P40084 ARI1YGL157W 1044 nt2.67□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms