Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SNCAP37840 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SNCAP37840 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNCAP37840 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
SNCAP37840 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SNCAP37840 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 AL356740.2-201ENST00000601559 647 ntBASIC17.16■□□□□ 0.34
SNCAP37840 pRNA.6-201ENST00000610482 90 ntBASIC17.16■□□□□ 0.34
SNCAP37840 pRNA.5-201ENST00000612139 90 ntBASIC17.16■□□□□ 0.34
SNCAP37840 pRNA.11-201ENST00000618423 90 ntBASIC17.16■□□□□ 0.34
SNCAP37840 pRNA.13-201ENST00000619112 90 ntBASIC17.16■□□□□ 0.34
SNCAP37840 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.16■□□□□ 0.34
SNCAP37840 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SNCAP37840 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SNCAP37840 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SNCAP37840 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.15■□□□□ 0.34
SNCAP37840 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 AC079089.2-201ENST00000531211 1277 ntBASIC17.15■□□□□ 0.34
SNCAP37840 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 AC087239.1-201ENST00000622671 572 ntBASIC17.15■□□□□ 0.34
SNCAP37840 AC068587.7-201ENST00000641602 218 ntBASIC17.15■□□□□ 0.34
SNCAP37840 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.15■□□□□ 0.34
SNCAP37840 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.15■□□□□ 0.34
SNCAP37840 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.15■□□□□ 0.34
SNCAP37840 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SNCAP37840 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNCAP37840 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SNCAP37840 OR7E47P-201ENST00000546390 1422 ntBASIC17.14■□□□□ 0.33
SNCAP37840 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.14■□□□□ 0.33
SNCAP37840 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.14■□□□□ 0.33
SNCAP37840 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.14■□□□□ 0.33
SNCAP37840 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.14■□□□□ 0.33
SNCAP37840 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 AC087289.5-201ENST00000586076 3175 ntBASIC17.14■□□□□ 0.33
SNCAP37840 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.14■□□□□ 0.33
SNCAP37840 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNCAP37840 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNCAP37840 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.13■□□□□ 0.33
SNCAP37840 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.13■□□□□ 0.33
SNCAP37840 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.13■□□□□ 0.33
SNCAP37840 AC099791.2-201ENST00000605725 427 ntBASIC17.13■□□□□ 0.33
SNCAP37840 AC092171.4-201ENST00000609130 632 ntBASIC17.13■□□□□ 0.33
SNCAP37840 AL031602.1-201ENST00000633169 911 ntBASIC17.13■□□□□ 0.33
SNCAP37840 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.13■□□□□ 0.33
SNCAP37840 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SNCAP37840 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNCAP37840 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNCAP37840 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.12■□□□□ 0.33
SNCAP37840 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNCAP37840 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.12■□□□□ 0.33
SNCAP37840 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNCAP37840 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
SNCAP37840 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNCAP37840 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SNCAP37840 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNCAP37840 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.12■□□□□ 0.33
SNCAP37840 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.12■□□□□ 0.33
SNCAP37840 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms