Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PDE6BP35913 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDE6BP35913 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.06■■□□□ 1.76
PDE6BP35913 AC003102.1-202ENST00000563394 1796 ntBASIC26.06■■□□□ 1.76
PDE6BP35913 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.06■■□□□ 1.76
PDE6BP35913 GXYLT1P3-201ENST00000453058 1193 ntBASIC26.06■■□□□ 1.76
PDE6BP35913 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.06■■□□□ 1.76
PDE6BP35913 Z99916.2-201ENST00000604037 246 ntBASIC26.06■■□□□ 1.76
PDE6BP35913 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
PDE6BP35913 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
PDE6BP35913 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDE6BP35913 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PDE6BP35913 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDE6BP35913 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDE6BP35913 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDE6BP35913 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDE6BP35913 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDE6BP35913 ECEL1P3-201ENST00000427961 737 ntBASIC26.05■■□□□ 1.76
PDE6BP35913 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PDE6BP35913 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.05■■□□□ 1.76
PDE6BP35913 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.05■■□□□ 1.76
PDE6BP35913 SPIB-206ENST00000596074 847 ntTSL 2 BASIC26.05■■□□□ 1.76
PDE6BP35913 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
PDE6BP35913 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
PDE6BP35913 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDE6BP35913 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.04■■□□□ 1.76
PDE6BP35913 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.03■■□□□ 1.76
PDE6BP35913 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
PDE6BP35913 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.03■■□□□ 1.76
PDE6BP35913 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
PDE6BP35913 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
PDE6BP35913 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.03■■□□□ 1.76
PDE6BP35913 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PDE6BP35913 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.03■■□□□ 1.76
PDE6BP35913 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
PDE6BP35913 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.02■■□□□ 1.76
PDE6BP35913 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.02■■□□□ 1.76
PDE6BP35913 KRT18P68-201ENST00000392293 1000 ntBASIC26.02■■□□□ 1.76
PDE6BP35913 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.02■■□□□ 1.76
PDE6BP35913 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.02■■□□□ 1.76
PDE6BP35913 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PDE6BP35913 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.02■■□□□ 1.76
PDE6BP35913 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.02■■□□□ 1.76
PDE6BP35913 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.02■■□□□ 1.76
PDE6BP35913 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PDE6BP35913 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PDE6BP35913 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 SNORA78-201ENST00000459373 127 ntBASIC26.01■■□□□ 1.75
PDE6BP35913 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.01■■□□□ 1.75
PDE6BP35913 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
PDE6BP35913 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.01■■□□□ 1.75
PDE6BP35913 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.01■■□□□ 1.75
PDE6BP35913 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.01■■□□□ 1.75
PDE6BP35913 REXO1L12P-201ENST00000622156 912 ntBASIC26.01■■□□□ 1.75
PDE6BP35913 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PDE6BP35913 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26■■□□□ 1.75
PDE6BP35913 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26■■□□□ 1.75
PDE6BP35913 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26■■□□□ 1.75
PDE6BP35913 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26■■□□□ 1.75
PDE6BP35913 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26■■□□□ 1.75
PDE6BP35913 AC233263.1-201ENST00000578059 224 ntBASIC26■■□□□ 1.75
PDE6BP35913 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26■■□□□ 1.75
PDE6BP35913 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.99■■□□□ 1.75
PDE6BP35913 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE6BP35913 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PDE6BP35913 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.99■■□□□ 1.75
PDE6BP35913 MFF-205ENST00000354503 1085 ntTSL 2 BASIC25.99■■□□□ 1.75
PDE6BP35913 AC211429.1-201ENST00000415277 523 ntBASIC25.99■■□□□ 1.75
PDE6BP35913 VMO1-204ENST00000441199 741 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms