Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.57■■□□□ 1.84
RFC4P35249 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RFC4P35249 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC26.57■■□□□ 1.84
RFC4P35249 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
RFC4P35249 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.56■■□□□ 1.84
RFC4P35249 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.56■■□□□ 1.84
RFC4P35249 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.56■■□□□ 1.84
RFC4P35249 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.56■■□□□ 1.84
RFC4P35249 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.56■■□□□ 1.84
RFC4P35249 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RFC4P35249 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
RFC4P35249 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 MCRIP2P1-201ENST00000394346 511 ntBASIC26.55■■□□□ 1.84
RFC4P35249 AC245052.3-201ENST00000450182 901 ntBASIC26.55■■□□□ 1.84
RFC4P35249 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.55■■□□□ 1.84
RFC4P35249 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC26.55■■□□□ 1.84
RFC4P35249 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC26.55■■□□□ 1.84
RFC4P35249 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
RFC4P35249 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RFC4P35249 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFC4P35249 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RFC4P35249 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFC4P35249 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RFC4P35249 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.54■■□□□ 1.84
RFC4P35249 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.54■■□□□ 1.84
RFC4P35249 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.54■■□□□ 1.84
RFC4P35249 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
RFC4P35249 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.54■■□□□ 1.84
RFC4P35249 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.53■■□□□ 1.84
RFC4P35249 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
RFC4P35249 SNORA78-201ENST00000459373 127 ntBASIC26.53■■□□□ 1.84
RFC4P35249 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFC4P35249 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFC4P35249 AC233263.1-201ENST00000578059 224 ntBASIC26.53■■□□□ 1.84
RFC4P35249 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
RFC4P35249 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFC4P35249 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC26.53■■□□□ 1.84
RFC4P35249 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RFC4P35249 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC26.53■■□□□ 1.84
RFC4P35249 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RFC4P35249 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
RFC4P35249 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
RFC4P35249 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.53■■□□□ 1.84
RFC4P35249 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC26.52■■□□□ 1.84
RFC4P35249 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.52■■□□□ 1.84
RFC4P35249 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.52■■□□□ 1.84
RFC4P35249 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC26.52■■□□□ 1.84
RFC4P35249 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.52■■□□□ 1.84
RFC4P35249 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.52■■□□□ 1.84
RFC4P35249 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC26.52■■□□□ 1.84
RFC4P35249 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RFC4P35249 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC26.52■■□□□ 1.84
RFC4P35249 REXO1L12P-201ENST00000622156 912 ntBASIC26.52■■□□□ 1.84
RFC4P35249 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
RFC4P35249 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.51■■□□□ 1.84
RFC4P35249 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
RFC4P35249 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.51■■□□□ 1.83
RFC4P35249 MFF-205ENST00000354503 1085 ntTSL 2 BASIC26.51■■□□□ 1.83
RFC4P35249 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 KRT18P68-201ENST00000392293 1000 ntBASIC26.51■■□□□ 1.83
RFC4P35249 AC211429.1-201ENST00000415277 523 ntBASIC26.51■■□□□ 1.83
RFC4P35249 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
RFC4P35249 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RFC4P35249 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFC4P35249 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RFC4P35249 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFC4P35249 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC26.5■■□□□ 1.83
RFC4P35249 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
RFC4P35249 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFC4P35249 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RFC4P35249 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.49■■□□□ 1.83
RFC4P35249 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RFC4P35249 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFC4P35249 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RFC4P35249 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.49■■□□□ 1.83
RFC4P35249 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC26.49■■□□□ 1.83
RFC4P35249 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC26.49■■□□□ 1.83
RFC4P35249 OR2A1-AS1-207ENST00000486094 819 ntBASIC26.49■■□□□ 1.83
RFC4P35249 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms