Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAP31040 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SDHAP31040 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.77■□□□□ 0.6
SDHAP31040 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SDHAP31040 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SDHAP31040 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SDHAP31040 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.77■□□□□ 0.59
SDHAP31040 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SDHAP31040 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
SDHAP31040 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.76■□□□□ 0.59
SDHAP31040 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.76■□□□□ 0.59
SDHAP31040 AC012414.1-201ENST00000556676 535 ntBASIC18.76■□□□□ 0.59
SDHAP31040 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.76■□□□□ 0.59
SDHAP31040 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SDHAP31040 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.76■□□□□ 0.59
SDHAP31040 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SDHAP31040 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SDHAP31040 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.76■□□□□ 0.59
SDHAP31040 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SDHAP31040 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
SDHAP31040 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.75■□□□□ 0.59
SDHAP31040 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.75■□□□□ 0.59
SDHAP31040 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.75■□□□□ 0.59
SDHAP31040 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SDHAP31040 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.74■□□□□ 0.59
SDHAP31040 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.74■□□□□ 0.59
SDHAP31040 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SDHAP31040 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.74■□□□□ 0.59
SDHAP31040 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SDHAP31040 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SDHAP31040 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SDHAP31040 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.74■□□□□ 0.59
SDHAP31040 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SDHAP31040 SUDS3P1-201ENST00000505831 966 ntBASIC18.74■□□□□ 0.59
SDHAP31040 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.74■□□□□ 0.59
SDHAP31040 AL139246.5-201ENST00000606645 996 ntBASIC18.74■□□□□ 0.59
SDHAP31040 AL354811.1-201ENST00000610286 706 ntBASIC18.74■□□□□ 0.59
SDHAP31040 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SDHAP31040 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SDHAP31040 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SDHAP31040 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.73■□□□□ 0.59
SDHAP31040 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.73■□□□□ 0.59
SDHAP31040 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SDHAP31040 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SDHAP31040 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
SDHAP31040 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
SDHAP31040 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 AL157384.1-201ENST00000445995 2473 ntBASIC18.72■□□□□ 0.59
SDHAP31040 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.72■□□□□ 0.59
SDHAP31040 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.72■□□□□ 0.59
SDHAP31040 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.72■□□□□ 0.59
SDHAP31040 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.72■□□□□ 0.59
SDHAP31040 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.72■□□□□ 0.59
SDHAP31040 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SDHAP31040 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SDHAP31040 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms