Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SLC29A4P1-201ENST00000398760 971 ntBASIC18.11■□□□□ 0.49
CD40P25942 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CD40P25942 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.11■□□□□ 0.49
CD40P25942 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.11■□□□□ 0.49
CD40P25942 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CD40P25942 AC008694.1-202ENST00000636953 945 ntBASIC18.11■□□□□ 0.49
CD40P25942 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.11■□□□□ 0.49
CD40P25942 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CD40P25942 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.1■□□□□ 0.49
CD40P25942 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
CD40P25942 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.1■□□□□ 0.49
CD40P25942 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 GUSBP6-202ENST00000438529 1198 ntBASIC18.1■□□□□ 0.49
CD40P25942 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CD40P25942 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CD40P25942 AC069236.1-201ENST00000604339 616 ntBASIC18.1■□□□□ 0.49
CD40P25942 AL591742.1-201ENST00000604433 565 ntBASIC18.1■□□□□ 0.49
CD40P25942 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.1■□□□□ 0.49
CD40P25942 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CD40P25942 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CD40P25942 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD40P25942 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CD40P25942 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.09■□□□□ 0.49
CD40P25942 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.09■□□□□ 0.49
CD40P25942 OR10C1-204ENST00000622521 1039 ntBASIC18.09■□□□□ 0.49
CD40P25942 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.09■□□□□ 0.49
CD40P25942 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CD40P25942 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CD40P25942 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.09■□□□□ 0.49
CD40P25942 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CD40P25942 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CD40P25942 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CD40P25942 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 AC245052.3-201ENST00000450182 901 ntBASIC18.08■□□□□ 0.48
CD40P25942 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.08■□□□□ 0.48
CD40P25942 AL162412.1-201ENST00000567129 965 ntBASIC18.08■□□□□ 0.48
CD40P25942 AC142086.2-201ENST00000569753 217 ntBASIC18.08■□□□□ 0.48
CD40P25942 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.08■□□□□ 0.48
CD40P25942 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.08■□□□□ 0.48
CD40P25942 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.08■□□□□ 0.48
CD40P25942 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.08■□□□□ 0.48
CD40P25942 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CD40P25942 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CD40P25942 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.07■□□□□ 0.48
CD40P25942 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.07■□□□□ 0.48
CD40P25942 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.07■□□□□ 0.48
CD40P25942 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.07■□□□□ 0.48
CD40P25942 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.07■□□□□ 0.48
CD40P25942 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD40P25942 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CD40P25942 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD40P25942 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.06■□□□□ 0.48
CD40P25942 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.06■□□□□ 0.48
CD40P25942 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD40P25942 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms