Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 UBP15YMR304W 3693 nt1.79□□□□□ -2.12
CDC39P25655 ENP2YGR145W 2124 nt1.79□□□□□ -2.12
CDC39P25655 ACA1YER045C 1470 nt1.78□□□□□ -2.12
CDC39P25655 MSA1YOR066W 1890 nt1.78□□□□□ -2.12
CDC39P25655 CIN1YOR349W 3045 nt1.78□□□□□ -2.12
CDC39P25655 CST9YLR394W 1449 nt1.78□□□□□ -2.12
CDC39P25655 YPR1YDR368W 939 nt1.78□□□□□ -2.12
CDC39P25655 CPR3YML078W 549 nt1.78□□□□□ -2.12
CDC39P25655 SIP18YMR175W 240 nt1.78□□□□□ -2.12
CDC39P25655 RRG7YOR305W 729 nt1.78□□□□□ -2.12
CDC39P25655 MF(ALPHA)1YPL187W 498 nt1.78□□□□□ -2.12
CDC39P25655 KAP123YER110C 3342 nt1.78□□□□□ -2.12
CDC39P25655 RIM13YMR154C 2184 nt1.78□□□□□ -2.12
CDC39P25655 KIP1YBL063W 3336 nt1.78□□□□□ -2.13
CDC39P25655 PEX14YGL153W 1026 nt1.78□□□□□ -2.13
CDC39P25655 PEX4YGR133W 552 nt1.78□□□□□ -2.13
CDC39P25655 YJR056CYJR056C 711 nt1.78□□□□□ -2.13
CDC39P25655 YAP7YOL028C 738 nt1.78□□□□□ -2.13
CDC39P25655 INO4YOL108C 456 nt1.78□□□□□ -2.13
CDC39P25655 YCK2YNL154C 1641 nt1.77□□□□□ -2.13
CDC39P25655 AEP3YPL005W 1821 nt1.77□□□□□ -2.13
CDC39P25655 GAL80YML051W 1308 nt1.77□□□□□ -2.13
CDC39P25655 ELG1YOR144C 2376 nt1.77□□□□□ -2.13
CDC39P25655 SAK1YER129W 3429 nt1.77□□□□□ -2.13
CDC39P25655 NUP170YBL079W 4509 nt1.77□□□□□ -2.13
CDC39P25655 THO1YER063W 657 nt1.77□□□□□ -2.13
CDC39P25655 YLR363W-AYLR363W-A 258 nt1.77□□□□□ -2.13
CDC39P25655 YBL077WYBL077W 432 nt1.77□□□□□ -2.13
CDC39P25655 CAF20YOR276W 486 nt1.77□□□□□ -2.13
CDC39P25655 APD1YBR151W 951 nt1.77□□□□□ -2.13
CDC39P25655 RLI1YDR091C 1827 nt1.77□□□□□ -2.13
CDC39P25655 SIN4YNL236W 2925 nt1.77□□□□□ -2.13
CDC39P25655 DSE4YNR067C 3354 nt1.77□□□□□ -2.13
CDC39P25655 KHA1YJL094C 2622 nt1.77□□□□□ -2.13
CDC39P25655 REV3YPL167C 4515 nt1.76□□□□□ -2.13
CDC39P25655 BNI4YNL233W 2679 nt1.76□□□□□ -2.13
CDC39P25655 FIN1YDR130C 876 nt1.76□□□□□ -2.13
CDC39P25655 ANS1YHR126C 480 nt1.76□□□□□ -2.13
CDC39P25655 BUR2YLR226W 1188 nt1.76□□□□□ -2.13
CDC39P25655 ERV41YML067C 1059 nt1.76□□□□□ -2.13
CDC39P25655 SAS2YMR127C 1017 nt1.76□□□□□ -2.13
CDC39P25655 YOR314WYOR314W 330 nt1.76□□□□□ -2.13
CDC39P25655 YBR096WYBR096W 693 nt1.76□□□□□ -2.13
CDC39P25655 TOR1YJR066W 7413 nt1.76□□□□□ -2.13
CDC39P25655 DUG2YBR281C 2637 nt1.76□□□□□ -2.13
CDC39P25655 GYP5YPL249C 2685 nt1.76□□□□□ -2.13
CDC39P25655 SNX41YDR425W 1878 nt1.76□□□□□ -2.13
CDC39P25655 YHR137C-AYHR137C-A 651 nt1.76□□□□□ -2.13
CDC39P25655 TPO5YKL174C 1857 nt1.75□□□□□ -2.13
CDC39P25655 UFD4YKL010C 4452 nt1.75□□□□□ -2.13
CDC39P25655 MMS2YGL087C 414 nt1.75□□□□□ -2.13
CDC39P25655 YKL131WYKL131W 522 nt1.75□□□□□ -2.13
CDC39P25655 YKR051WYKR051W 1257 nt1.75□□□□□ -2.13
CDC39P25655 INP1YMR204C 1263 nt1.75□□□□□ -2.13
CDC39P25655 PUF6YDR496C 1971 nt1.75□□□□□ -2.13
CDC39P25655 HTA1YDR225W 399 nt1.75□□□□□ -2.13
CDC39P25655 GCN4YEL009C 846 nt1.75□□□□□ -2.13
CDC39P25655 YHR073W-AYHR073W-A 177 nt1.75□□□□□ -2.13
CDC39P25655 SNX4YJL036W 1272 nt1.75□□□□□ -2.13
CDC39P25655 RSM26YJR101W 801 nt1.75□□□□□ -2.13
CDC39P25655 YAR075WYAR075W 474 nt1.75□□□□□ -2.13
CDC39P25655 AAH1YNL141W 1044 nt1.75□□□□□ -2.13
CDC39P25655 YNL184CYNL184C 327 nt1.75□□□□□ -2.13
CDC39P25655 KRE33YNL132W 3171 nt1.74□□□□□ -2.13
CDC39P25655 YKL075CYKL075C 1353 nt1.74□□□□□ -2.13
CDC39P25655 ITT1YML068W 1395 nt1.74□□□□□ -2.13
CDC39P25655 TOR2YKL203C 7425 nt1.74□□□□□ -2.13
CDC39P25655 MTL1YGR023W 1656 nt1.74□□□□□ -2.13
CDC39P25655 MET14YKL001C 609 nt1.74□□□□□ -2.13
CDC39P25655 MTR2YKL186C 555 nt1.74□□□□□ -2.13
CDC39P25655 HNT3YOR258W 654 nt1.74□□□□□ -2.13
CDC39P25655 ARO7YPR060C 771 nt1.74□□□□□ -2.13
CDC39P25655 YPR078CYPR078C 1119 nt1.74□□□□□ -2.13
CDC39P25655 PIS1YPR113W 663 nt1.74□□□□□ -2.13
CDC39P25655 TOF1YNL273W 3717 nt1.74□□□□□ -2.13
CDC39P25655 ECM18YDR125C 1362 nt1.74□□□□□ -2.13
CDC39P25655 PSK1YAL017W 4071 nt1.73□□□□□ -2.13
CDC39P25655 YFL015CYFL015C 495 nt1.73□□□□□ -2.13
CDC39P25655 SYM1YLR251W 594 nt1.73□□□□□ -2.13
CDC39P25655 DGR1YNL130C-A 147 nt1.73□□□□□ -2.13
CDC39P25655 SIP3YNL257C 3690 nt1.73□□□□□ -2.13
CDC39P25655 YHL045WYHL045W 348 nt1.73□□□□□ -2.13
CDC39P25655 VMA5YKL080W 1179 nt1.73□□□□□ -2.13
CDC39P25655 SPC3YLR066W 555 nt1.73□□□□□ -2.13
CDC39P25655 SWD3YBR175W 948 nt1.73□□□□□ -2.13
CDC39P25655 EAP1YKL204W 1899 nt1.73□□□□□ -2.13
CDC39P25655 YGR293CYGR293C 462 nt1.72□□□□□ -2.13
CDC39P25655 TCD1YHR003C 1290 nt1.72□□□□□ -2.13
CDC39P25655 IME1YJR094C 1083 nt1.72□□□□□ -2.13
CDC39P25655 ECI1YLR284C 843 nt1.72□□□□□ -2.13
CDC39P25655 SRT1YMR101C 1032 nt1.72□□□□□ -2.13
CDC39P25655 YNL109WYNL109W 546 nt1.72□□□□□ -2.13
CDC39P25655 SWC4YGR002C 1431 nt1.72□□□□□ -2.13
CDC39P25655 SMT3YDR510W 306 nt1.72□□□□□ -2.13
CDC39P25655 NNF1YJR112W 606 nt1.72□□□□□ -2.13
CDC39P25655 snR11snR11 258 nt1.72□□□□□ -2.13
CDC39P25655 POL30YBR088C 777 nt1.72□□□□□ -2.13
CDC39P25655 YJR098CYJR098C 1971 nt1.72□□□□□ -2.13
CDC39P25655 SSD1YDR293C 3753 nt1.71□□□□□ -2.13
CDC39P25655 YKU80YMR106C 1890 nt1.71□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms