Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NFKB1P19838 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NFKB1P19838 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NFKB1P19838 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
NFKB1P19838 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.32■■□□□ 1
NFKB1P19838 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.32■■□□□ 1
NFKB1P19838 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.32■■□□□ 1
NFKB1P19838 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NFKB1P19838 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NFKB1P19838 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
NFKB1P19838 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NFKB1P19838 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.3■■□□□ 1
NFKB1P19838 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.3■■□□□ 1
NFKB1P19838 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.3■■□□□ 1
NFKB1P19838 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.3■■□□□ 1
NFKB1P19838 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.3■■□□□ 1
NFKB1P19838 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.3■■□□□ 1
NFKB1P19838 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.3■■□□□ 1
NFKB1P19838 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.3■■□□□ 1
NFKB1P19838 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.3■■□□□ 1
NFKB1P19838 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NFKB1P19838 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NFKB1P19838 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.29■■□□□ 1
NFKB1P19838 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.29■■□□□ 1
NFKB1P19838 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.29■■□□□ 1
NFKB1P19838 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.29■■□□□ 1
NFKB1P19838 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 AC104187.1-201ENST00000607510 612 ntBASIC21.29■■□□□ 1
NFKB1P19838 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.29■■□□□ 1
NFKB1P19838 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.29■■□□□ 1
NFKB1P19838 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.28■■□□□ 1
NFKB1P19838 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKB1P19838 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
NFKB1P19838 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.28■■□□□ 1
NFKB1P19838 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
NFKB1P19838 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.28■■□□□ 1
NFKB1P19838 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.28■■□□□ 1
NFKB1P19838 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.28■■□□□ 1
NFKB1P19838 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.28■■□□□ 1
NFKB1P19838 AC138907.5-202ENST00000569484 235 ntBASIC21.28■■□□□ 1
NFKB1P19838 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
NFKB1P19838 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NFKB1P19838 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKB1P19838 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NFKB1P19838 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.28■■□□□ 1
NFKB1P19838 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.27■■□□□ 1
NFKB1P19838 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.27■■□□□ 1
NFKB1P19838 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
NFKB1P19838 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.27■■□□□ 1
NFKB1P19838 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
NFKB1P19838 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.27■■□□□ 1
NFKB1P19838 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.27■■□□□ 1
NFKB1P19838 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.27■■□□□ 1
NFKB1P19838 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.27■■□□□ 1
NFKB1P19838 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKB1P19838 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NFKB1P19838 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
NFKB1P19838 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NFKB1P19838 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.26■□□□□ 0.99
NFKB1P19838 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
NFKB1P19838 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NFKB1P19838 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.26■□□□□ 0.99
NFKB1P19838 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NFKB1P19838 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
NFKB1P19838 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 AC008175.2-201ENST00000612840 297 ntBASIC21.26■□□□□ 0.99
NFKB1P19838 AC004854.2-201ENST00000608450 1441 ntBASIC21.26■□□□□ 0.99
NFKB1P19838 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NFKB1P19838 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms