Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.63■□□□□ 0.89
NELFEP18615 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NELFEP18615 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NELFEP18615 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.63■□□□□ 0.89
NELFEP18615 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.63■□□□□ 0.89
NELFEP18615 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFEP18615 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.62■□□□□ 0.89
NELFEP18615 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
NELFEP18615 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.62■□□□□ 0.89
NELFEP18615 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.62■□□□□ 0.89
NELFEP18615 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.62■□□□□ 0.89
NELFEP18615 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.62■□□□□ 0.89
NELFEP18615 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
NELFEP18615 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFEP18615 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFEP18615 OR7E47P-201ENST00000546390 1422 ntBASIC20.61■□□□□ 0.89
NELFEP18615 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFEP18615 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.61■□□□□ 0.89
NELFEP18615 FAM99A-202ENST00000538190 1989 ntBASIC20.61■□□□□ 0.89
NELFEP18615 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.61■□□□□ 0.89
NELFEP18615 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NELFEP18615 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NELFEP18615 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NELFEP18615 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.61■□□□□ 0.89
NELFEP18615 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFEP18615 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFEP18615 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.61■□□□□ 0.89
NELFEP18615 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFEP18615 KRT87P-202ENST00000534226 1464 ntBASIC20.61■□□□□ 0.89
NELFEP18615 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
NELFEP18615 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFEP18615 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFEP18615 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NELFEP18615 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NELFEP18615 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
NELFEP18615 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NELFEP18615 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
NELFEP18615 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.6■□□□□ 0.89
NELFEP18615 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.6■□□□□ 0.89
NELFEP18615 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.6■□□□□ 0.89
NELFEP18615 AC080038.1-201ENST00000611274 1154 ntBASIC20.6■□□□□ 0.89
NELFEP18615 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
NELFEP18615 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 AP004607.7-201ENST00000527152 1677 ntBASIC20.6■□□□□ 0.89
NELFEP18615 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFEP18615 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
NELFEP18615 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFEP18615 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFEP18615 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFEP18615 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.59■□□□□ 0.89
NELFEP18615 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.59■□□□□ 0.89
NELFEP18615 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFEP18615 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.59■□□□□ 0.89
NELFEP18615 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NELFEP18615 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NELFEP18615 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.59■□□□□ 0.89
NELFEP18615 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NELFEP18615 AC055733.4-201ENST00000638462 1354 ntBASIC20.59■□□□□ 0.89
NELFEP18615 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFEP18615 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
NELFEP18615 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NELFEP18615 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
NELFEP18615 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NELFEP18615 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
NELFEP18615 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NELFEP18615 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms