Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS1P17812 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS1P17812 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.11■□□□□ 0.97
CTPS1P17812 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
CTPS1P17812 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
CTPS1P17812 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTPS1P17812 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CTPS1P17812 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS1P17812 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.1■□□□□ 0.97
CTPS1P17812 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS1P17812 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CTPS1P17812 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.1■□□□□ 0.97
CTPS1P17812 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS1P17812 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS1P17812 POU5F1P4-201ENST00000413175 1085 ntBASIC21.1■□□□□ 0.97
CTPS1P17812 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.1■□□□□ 0.97
CTPS1P17812 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.1■□□□□ 0.97
CTPS1P17812 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.1■□□□□ 0.97
CTPS1P17812 AL137784.2-201ENST00000607332 1000 ntBASIC21.1■□□□□ 0.97
CTPS1P17812 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.1■□□□□ 0.97
CTPS1P17812 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CTPS1P17812 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CTPS1P17812 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CTPS1P17812 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTPS1P17812 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CTPS1P17812 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.09■□□□□ 0.97
CTPS1P17812 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTPS1P17812 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CTPS1P17812 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.09■□□□□ 0.97
CTPS1P17812 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.09■□□□□ 0.97
CTPS1P17812 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.09■□□□□ 0.97
CTPS1P17812 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.09■□□□□ 0.97
CTPS1P17812 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.09■□□□□ 0.97
CTPS1P17812 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTPS1P17812 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTPS1P17812 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CTPS1P17812 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.09■□□□□ 0.97
CTPS1P17812 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.08■□□□□ 0.97
CTPS1P17812 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CTPS1P17812 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CTPS1P17812 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CTPS1P17812 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CTPS1P17812 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.08■□□□□ 0.97
CTPS1P17812 MYCNOS-205ENST00000641950 531 ntBASIC21.08■□□□□ 0.97
CTPS1P17812 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CTPS1P17812 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.07■□□□□ 0.96
CTPS1P17812 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CTPS1P17812 KRT18P20-201ENST00000548986 1279 ntBASIC21.07■□□□□ 0.96
CTPS1P17812 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.07■□□□□ 0.96
CTPS1P17812 AC011767.1-201ENST00000617410 1153 ntBASIC21.07■□□□□ 0.96
CTPS1P17812 AC120498.10-201ENST00000621827 505 ntBASIC21.07■□□□□ 0.96
CTPS1P17812 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 PKD1P6-201ENST00000343738 4769 ntBASIC21.07■□□□□ 0.96
CTPS1P17812 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.07■□□□□ 0.96
CTPS1P17812 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.07■□□□□ 0.96
CTPS1P17812 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CTPS1P17812 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.06■□□□□ 0.96
CTPS1P17812 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.06■□□□□ 0.96
CTPS1P17812 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CTPS1P17812 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.06■□□□□ 0.96
CTPS1P17812 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CTPS1P17812 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CTPS1P17812 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.06■□□□□ 0.96
CTPS1P17812 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTPS1P17812 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
CTPS1P17812 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CTPS1P17812 KRT18P11-201ENST00000435214 1283 ntBASIC21.05■□□□□ 0.96
CTPS1P17812 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.05■□□□□ 0.96
CTPS1P17812 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.05■□□□□ 0.96
CTPS1P17812 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.05■□□□□ 0.96
CTPS1P17812 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.05■□□□□ 0.96
CTPS1P17812 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CTPS1P17812 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.04■□□□□ 0.96
CTPS1P17812 CLDN5-201ENST00000403084 2357 ntBASIC21.04■□□□□ 0.96
CTPS1P17812 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CTPS1P17812 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTPS1P17812 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms