Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.34■□□□□ 0.53
UBCP0CG48 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
UBCP0CG48 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.34■□□□□ 0.53
UBCP0CG48 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBCP0CG48 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBCP0CG48 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBCP0CG48 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBCP0CG48 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBCP0CG48 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.33■□□□□ 0.53
UBCP0CG48 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBCP0CG48 AL136116.3-201ENST00000402907 1138 ntBASIC18.33■□□□□ 0.52
UBCP0CG48 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
UBCP0CG48 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 AC133561.4-201ENST00000566112 224 ntBASIC18.33■□□□□ 0.52
UBCP0CG48 MIR4767-201ENST00000582827 78 ntBASIC18.33■□□□□ 0.52
UBCP0CG48 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.33■□□□□ 0.52
UBCP0CG48 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.33■□□□□ 0.52
UBCP0CG48 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 AL157384.1-201ENST00000445995 2473 ntBASIC18.33■□□□□ 0.52
UBCP0CG48 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.33■□□□□ 0.52
UBCP0CG48 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.33■□□□□ 0.52
UBCP0CG48 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.33■□□□□ 0.52
UBCP0CG48 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBCP0CG48 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
UBCP0CG48 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
UBCP0CG48 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 AC233992.3-201ENST00000607491 485 ntBASIC18.32■□□□□ 0.52
UBCP0CG48 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
UBCP0CG48 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.32■□□□□ 0.52
UBCP0CG48 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.32■□□□□ 0.52
UBCP0CG48 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
UBCP0CG48 AC009237.3-201ENST00000393279 1427 ntBASIC18.32■□□□□ 0.52
UBCP0CG48 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
UBCP0CG48 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBCP0CG48 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
UBCP0CG48 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 IGHV3-19-201ENST00000521488 291 ntBASIC18.31■□□□□ 0.52
UBCP0CG48 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.31■□□□□ 0.52
UBCP0CG48 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.31■□□□□ 0.52
UBCP0CG48 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.31■□□□□ 0.52
UBCP0CG48 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
UBCP0CG48 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.31■□□□□ 0.52
UBCP0CG48 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.31■□□□□ 0.52
UBCP0CG48 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.31■□□□□ 0.52
UBCP0CG48 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.31■□□□□ 0.52
UBCP0CG48 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
UBCP0CG48 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
UBCP0CG48 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.3■□□□□ 0.52
UBCP0CG48 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.3■□□□□ 0.52
UBCP0CG48 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
UBCP0CG48 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
UBCP0CG48 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.3■□□□□ 0.52
UBCP0CG48 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.3■□□□□ 0.52
UBCP0CG48 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.3■□□□□ 0.52
UBCP0CG48 AC126544.1-201ENST00000580842 1059 ntBASIC18.3■□□□□ 0.52
UBCP0CG48 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
UBCP0CG48 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
UBCP0CG48 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
UBCP0CG48 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
UBCP0CG48 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
UBCP0CG48 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms