Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
THBS1P07996 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
THBS1P07996 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.27■□□□□ 0.68
THBS1P07996 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
THBS1P07996 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
THBS1P07996 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.27■□□□□ 0.68
THBS1P07996 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.27■□□□□ 0.68
THBS1P07996 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
THBS1P07996 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
THBS1P07996 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
THBS1P07996 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.26■□□□□ 0.67
THBS1P07996 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.26■□□□□ 0.67
THBS1P07996 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
THBS1P07996 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 AC027612.3-201ENST00000413684 1047 ntBASIC19.26■□□□□ 0.67
THBS1P07996 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
THBS1P07996 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.26■□□□□ 0.67
THBS1P07996 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
THBS1P07996 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.26■□□□□ 0.67
THBS1P07996 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
THBS1P07996 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
THBS1P07996 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
THBS1P07996 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.25■□□□□ 0.67
THBS1P07996 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.25■□□□□ 0.67
THBS1P07996 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
THBS1P07996 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 MIR6084-201ENST00000622012 110 ntBASIC19.25■□□□□ 0.67
THBS1P07996 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.25■□□□□ 0.67
THBS1P07996 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
THBS1P07996 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
THBS1P07996 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
THBS1P07996 KRT87P-202ENST00000534226 1464 ntBASIC19.24■□□□□ 0.67
THBS1P07996 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS1P07996 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
THBS1P07996 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.24■□□□□ 0.67
THBS1P07996 AC079140.4-201ENST00000507448 529 ntBASIC19.24■□□□□ 0.67
THBS1P07996 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS1P07996 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS1P07996 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.24■□□□□ 0.67
THBS1P07996 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.24■□□□□ 0.67
THBS1P07996 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
THBS1P07996 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
THBS1P07996 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.23■□□□□ 0.67
THBS1P07996 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
THBS1P07996 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
THBS1P07996 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 AC006128.1-201ENST00000624704 1661 ntBASIC19.23■□□□□ 0.67
THBS1P07996 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
THBS1P07996 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
THBS1P07996 AP004607.4-201ENST00000530158 1459 ntBASIC19.22■□□□□ 0.67
THBS1P07996 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.22■□□□□ 0.67
THBS1P07996 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
THBS1P07996 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.22■□□□□ 0.67
THBS1P07996 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms