Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC092368.3-202ENST00000574180 1591 ntBASIC13.26□□□□□ -0.29
APOBP04114 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 AL023875.1-201ENST00000640777 796 ntBASIC13.26□□□□□ -0.29
APOBP04114 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
APOBP04114 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.26□□□□□ -0.29
APOBP04114 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
APOBP04114 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.26□□□□□ -0.29
APOBP04114 AC145285.6-201ENST00000604632 637 ntBASIC13.25□□□□□ -0.29
APOBP04114 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
APOBP04114 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBP04114 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
APOBP04114 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBP04114 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBP04114 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.25□□□□□ -0.29
APOBP04114 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBP04114 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
APOBP04114 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBP04114 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.25□□□□□ -0.29
APOBP04114 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBP04114 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBP04114 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
APOBP04114 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.24□□□□□ -0.29
APOBP04114 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBP04114 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBP04114 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBP04114 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
APOBP04114 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBP04114 KRT18P35-201ENST00000510488 1269 ntBASIC13.24□□□□□ -0.29
APOBP04114 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBP04114 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
APOBP04114 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBP04114 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBP04114 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBP04114 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
APOBP04114 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBP04114 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBP04114 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBP04114 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.23□□□□□ -0.29
APOBP04114 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 AC092068.2-201ENST00000590491 1708 ntBASIC13.23□□□□□ -0.29
APOBP04114 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
APOBP04114 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
APOBP04114 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 AC137767.1-201ENST00000602918 1920 ntBASIC13.23□□□□□ -0.29
APOBP04114 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 POM121L13P-201ENST00000422362 380 ntBASIC13.23□□□□□ -0.29
APOBP04114 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBP04114 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
APOBP04114 GRAP-204ENST00000573099 846 ntTSL 3 BASIC13.23□□□□□ -0.29
APOBP04114 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.23□□□□□ -0.29
APOBP04114 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
APOBP04114 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
APOBP04114 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms