Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PDGFBP01127 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PDGFBP01127 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1
PDGFBP01127 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDGFBP01127 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDGFBP01127 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.32■■□□□ 1
PDGFBP01127 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.32■■□□□ 1
PDGFBP01127 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.32■■□□□ 1
PDGFBP01127 AL355075.4-201ENST00000554988 638 ntBASIC21.32■■□□□ 1
PDGFBP01127 C2orf69P4-201ENST00000565394 541 ntBASIC21.32■■□□□ 1
PDGFBP01127 FAM21FP-204ENST00000608637 956 ntBASIC21.32■■□□□ 1
PDGFBP01127 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
PDGFBP01127 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.32■■□□□ 1
PDGFBP01127 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDGFBP01127 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.31■■□□□ 1
PDGFBP01127 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.31■■□□□ 1
PDGFBP01127 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.31■■□□□ 1
PDGFBP01127 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDGFBP01127 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.31■■□□□ 1
PDGFBP01127 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
PDGFBP01127 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.3■■□□□ 1
PDGFBP01127 AC091799.1-201ENST00000422823 811 ntBASIC21.3■■□□□ 1
PDGFBP01127 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.3■■□□□ 1
PDGFBP01127 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 MIR4785-201ENST00000585005 73 ntBASIC21.3■■□□□ 1
PDGFBP01127 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 AC100791.3-201ENST00000617619 330 ntBASIC21.3■■□□□ 1
PDGFBP01127 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.3■■□□□ 1
PDGFBP01127 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDGFBP01127 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.3■■□□□ 1
PDGFBP01127 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
PDGFBP01127 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.29■■□□□ 1
PDGFBP01127 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.29■■□□□ 1
PDGFBP01127 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.29■■□□□ 1
PDGFBP01127 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDGFBP01127 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.28■■□□□ 1
PDGFBP01127 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.28■■□□□ 1
PDGFBP01127 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.28■■□□□ 1
PDGFBP01127 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PDGFBP01127 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
PDGFBP01127 CD177P1-201ENST00000606252 935 ntBASIC21.28■■□□□ 1
PDGFBP01127 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 AC113410.3-201ENST00000623366 203 ntBASIC21.28■■□□□ 1
PDGFBP01127 AL023875.1-201ENST00000640777 796 ntBASIC21.28■■□□□ 1
PDGFBP01127 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDGFBP01127 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PDGFBP01127 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFBP01127 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PDGFBP01127 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
PDGFBP01127 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFBP01127 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PDGFBP01127 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFBP01127 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDGFBP01127 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
PDGFBP01127 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PDGFBP01127 AC124016.1-201ENST00000609552 612 ntBASIC21.27■■□□□ 1
PDGFBP01127 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDGFBP01127 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDGFBP01127 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDGFBP01127 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDGFBP01127 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms