Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX4O95219 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX4O95219 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SNX4O95219 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.6■□□□□ 0.73
SNX4O95219 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
SNX4O95219 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.6■□□□□ 0.73
SNX4O95219 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 AC079140.4-201ENST00000507448 529 ntBASIC19.6■□□□□ 0.73
SNX4O95219 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SNX4O95219 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX4O95219 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNX4O95219 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNX4O95219 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.59■□□□□ 0.73
SNX4O95219 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX4O95219 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 RNF165-205ENST00000588679 2904 ntBASIC19.59■□□□□ 0.73
SNX4O95219 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SNX4O95219 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SNX4O95219 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX4O95219 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX4O95219 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX4O95219 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SNX4O95219 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX4O95219 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX4O95219 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.73
SNX4O95219 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX4O95219 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
SNX4O95219 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX4O95219 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SNX4O95219 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.58■□□□□ 0.72
SNX4O95219 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.58■□□□□ 0.72
SNX4O95219 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SNX4O95219 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX4O95219 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
SNX4O95219 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX4O95219 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX4O95219 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNX4O95219 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX4O95219 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.57■□□□□ 0.72
SNX4O95219 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.57■□□□□ 0.72
SNX4O95219 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
SNX4O95219 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SNX4O95219 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNX4O95219 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX4O95219 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX4O95219 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX4O95219 AC055733.4-201ENST00000638462 1354 ntBASIC19.57■□□□□ 0.72
SNX4O95219 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX4O95219 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX4O95219 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.56■□□□□ 0.72
SNX4O95219 AC092666.2-201ENST00000613287 246 ntBASIC19.56■□□□□ 0.72
SNX4O95219 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX4O95219 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX4O95219 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX4O95219 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms