Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.51■■□□□ 1.19
CSPG5O95196 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CSPG5O95196 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSPG5O95196 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSPG5O95196 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CSPG5O95196 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.51■■□□□ 1.19
CSPG5O95196 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.51■■□□□ 1.19
CSPG5O95196 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSPG5O95196 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CSPG5O95196 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.5■■□□□ 1.19
CSPG5O95196 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 RBM17P2-201ENST00000616397 1405 ntBASIC22.5■■□□□ 1.19
CSPG5O95196 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.5■■□□□ 1.19
CSPG5O95196 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.5■■□□□ 1.19
CSPG5O95196 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.5■■□□□ 1.19
CSPG5O95196 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 LSM12P1-201ENST00000411836 588 ntBASIC22.5■■□□□ 1.19
CSPG5O95196 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CSPG5O95196 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.5■■□□□ 1.19
CSPG5O95196 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.5■■□□□ 1.19
CSPG5O95196 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.5■■□□□ 1.19
CSPG5O95196 AL591742.1-201ENST00000604433 565 ntBASIC22.5■■□□□ 1.19
CSPG5O95196 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.5■■□□□ 1.19
CSPG5O95196 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CSPG5O95196 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CSPG5O95196 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.49■■□□□ 1.19
CSPG5O95196 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.49■■□□□ 1.19
CSPG5O95196 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.49■■□□□ 1.19
CSPG5O95196 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.49■■□□□ 1.19
CSPG5O95196 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.49■■□□□ 1.19
CSPG5O95196 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC22.49■■□□□ 1.19
CSPG5O95196 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CSPG5O95196 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CSPG5O95196 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.49■■□□□ 1.19
CSPG5O95196 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC22.48■■□□□ 1.19
CSPG5O95196 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22.48■■□□□ 1.19
CSPG5O95196 AP003097.1-201ENST00000530657 1135 ntBASIC22.48■■□□□ 1.19
CSPG5O95196 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.48■■□□□ 1.19
CSPG5O95196 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CSPG5O95196 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.48■■□□□ 1.19
CSPG5O95196 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CSPG5O95196 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.47■■□□□ 1.19
CSPG5O95196 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.47■■□□□ 1.19
CSPG5O95196 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.47■■□□□ 1.19
CSPG5O95196 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CSPG5O95196 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.47■■□□□ 1.19
CSPG5O95196 AC026366.1-201ENST00000488803 879 ntBASIC22.47■■□□□ 1.19
CSPG5O95196 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.47■■□□□ 1.19
CSPG5O95196 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 AC137767.1-201ENST00000602918 1920 ntBASIC22.47■■□□□ 1.19
CSPG5O95196 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CSPG5O95196 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CSPG5O95196 KRT17P1-201ENST00000399211 1546 ntBASIC22.47■■□□□ 1.19
CSPG5O95196 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSPG5O95196 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CSPG5O95196 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.46■■□□□ 1.19
CSPG5O95196 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.46■■□□□ 1.19
CSPG5O95196 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC22.46■■□□□ 1.19
CSPG5O95196 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.46■■□□□ 1.19
CSPG5O95196 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSPG5O95196 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CSPG5O95196 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.46■■□□□ 1.19
CSPG5O95196 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.46■■□□□ 1.19
CSPG5O95196 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.46■■□□□ 1.19
CSPG5O95196 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.46■■□□□ 1.19
CSPG5O95196 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CSPG5O95196 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms