Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP40O75818 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.55■■□□□ 1.04
RPP40O75818 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
RPP40O75818 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.55■■□□□ 1.04
RPP40O75818 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
RPP40O75818 KRT18P20-201ENST00000548986 1279 ntBASIC21.55■■□□□ 1.04
RPP40O75818 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.55■■□□□ 1.04
RPP40O75818 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP40O75818 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP40O75818 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP40O75818 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.54■■□□□ 1.04
RPP40O75818 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.54■■□□□ 1.04
RPP40O75818 AC010141.2-201ENST00000452426 721 ntBASIC21.54■■□□□ 1.04
RPP40O75818 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPP40O75818 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP40O75818 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RPP40O75818 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPP40O75818 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.53■■□□□ 1.04
RPP40O75818 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RPP40O75818 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPP40O75818 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.53■■□□□ 1.04
RPP40O75818 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP40O75818 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RPP40O75818 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP40O75818 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP40O75818 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.52■■□□□ 1.04
RPP40O75818 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.52■■□□□ 1.04
RPP40O75818 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPP40O75818 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.52■■□□□ 1.04
RPP40O75818 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.52■■□□□ 1.04
RPP40O75818 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPP40O75818 AC013268.1-206ENST00000638368 961 ntBASIC21.52■■□□□ 1.04
RPP40O75818 AC112229.1-201ENST00000639295 961 ntBASIC21.52■■□□□ 1.04
RPP40O75818 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPP40O75818 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.52■■□□□ 1.04
RPP40O75818 FBXW4P1-201ENST00000426721 2239 ntBASIC21.52■■□□□ 1.04
RPP40O75818 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RPP40O75818 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.51■■□□□ 1.03
RPP40O75818 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.51■■□□□ 1.03
RPP40O75818 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP40O75818 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP40O75818 AC055733.4-201ENST00000638462 1354 ntBASIC21.51■■□□□ 1.03
RPP40O75818 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP40O75818 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPP40O75818 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.51■■□□□ 1.03
RPP40O75818 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.51■■□□□ 1.03
RPP40O75818 AC138907.5-202ENST00000569484 235 ntBASIC21.51■■□□□ 1.03
RPP40O75818 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.51■■□□□ 1.03
RPP40O75818 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
RPP40O75818 AC010542.4-201ENST00000563151 1910 ntBASIC21.51■■□□□ 1.03
RPP40O75818 MKRN4P-201ENST00000444706 1521 ntBASIC21.5■■□□□ 1.03
RPP40O75818 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.5■■□□□ 1.03
RPP40O75818 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 MIPEPP3-201ENST00000412105 444 ntBASIC21.5■■□□□ 1.03
RPP40O75818 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.5■■□□□ 1.03
RPP40O75818 AL034346.1-201ENST00000568244 1277 ntBASIC21.5■■□□□ 1.03
RPP40O75818 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RPP40O75818 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.5■■□□□ 1.03
RPP40O75818 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPP40O75818 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
RPP40O75818 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.5■■□□□ 1.03
RPP40O75818 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.49■■□□□ 1.03
RPP40O75818 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.49■■□□□ 1.03
RPP40O75818 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP40O75818 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RPP40O75818 PRORSD1P-201ENST00000295112 541 ntBASIC21.49■■□□□ 1.03
RPP40O75818 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.49■■□□□ 1.03
RPP40O75818 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.49■■□□□ 1.03
RPP40O75818 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.49■■□□□ 1.03
RPP40O75818 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.49■■□□□ 1.03
RPP40O75818 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPP40O75818 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.49■■□□□ 1.03
RPP40O75818 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
RPP40O75818 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms