Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE3O75131 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE3O75131 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE3O75131 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE3O75131 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE3O75131 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE3O75131 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CPNE3O75131 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE3O75131 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.06■□□□□ 0.8
CPNE3O75131 POU5F1P4-201ENST00000413175 1085 ntBASIC20.06■□□□□ 0.8
CPNE3O75131 TSPY6P-201ENST00000448518 926 ntBASIC20.06■□□□□ 0.8
CPNE3O75131 TERF1P5-201ENST00000477545 1207 ntBASIC20.06■□□□□ 0.8
CPNE3O75131 SLC7A5P2-201ENST00000553010 536 ntBASIC20.06■□□□□ 0.8
CPNE3O75131 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE3O75131 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE3O75131 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE3O75131 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
CPNE3O75131 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 SLC29A4P1-201ENST00000398760 971 ntBASIC20.05■□□□□ 0.8
CPNE3O75131 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CPNE3O75131 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CPNE3O75131 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.05■□□□□ 0.8
CPNE3O75131 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPNE3O75131 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CPNE3O75131 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CPNE3O75131 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
CPNE3O75131 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.04■□□□□ 0.8
CPNE3O75131 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE3O75131 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE3O75131 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE3O75131 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE3O75131 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE3O75131 AC142086.2-201ENST00000569753 217 ntBASIC20.04■□□□□ 0.8
CPNE3O75131 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPNE3O75131 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CPNE3O75131 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE3O75131 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CPNE3O75131 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPNE3O75131 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE3O75131 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPNE3O75131 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE3O75131 AF201337.1-201ENST00000520239 748 ntBASIC20.03■□□□□ 0.8
CPNE3O75131 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE3O75131 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE3O75131 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE3O75131 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
CPNE3O75131 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE3O75131 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE3O75131 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
CPNE3O75131 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE3O75131 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.02■□□□□ 0.8
CPNE3O75131 GUSBP6-202ENST00000438529 1198 ntBASIC20.02■□□□□ 0.8
CPNE3O75131 AC007322.4-201ENST00000509611 723 ntBASIC20.02■□□□□ 0.8
CPNE3O75131 AC133552.2-202ENST00000575694 574 ntBASIC20.02■□□□□ 0.8
CPNE3O75131 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms