Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.69■□□□□ 0.74
CTNSO60931 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNSO60931 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CTNSO60931 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.69■□□□□ 0.74
CTNSO60931 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.69■□□□□ 0.74
CTNSO60931 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.69■□□□□ 0.74
CTNSO60931 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CTNSO60931 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CTNSO60931 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNSO60931 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNSO60931 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNSO60931 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CTNSO60931 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.68■□□□□ 0.74
CTNSO60931 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.68■□□□□ 0.74
CTNSO60931 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CTNSO60931 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.68■□□□□ 0.74
CTNSO60931 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CTNSO60931 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CTNSO60931 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CTNSO60931 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
CTNSO60931 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.67■□□□□ 0.74
CTNSO60931 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNSO60931 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNSO60931 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNSO60931 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CTNSO60931 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.67■□□□□ 0.74
CTNSO60931 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.67■□□□□ 0.74
CTNSO60931 IKBKGP1-201ENST00000612193 1073 ntBASIC19.67■□□□□ 0.74
CTNSO60931 AC092666.2-201ENST00000613287 246 ntBASIC19.67■□□□□ 0.74
CTNSO60931 MYCNOS-205ENST00000641950 531 ntBASIC19.67■□□□□ 0.74
CTNSO60931 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CTNSO60931 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CTNSO60931 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
CTNSO60931 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.66■□□□□ 0.74
CTNSO60931 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTNSO60931 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTNSO60931 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CTNSO60931 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.66■□□□□ 0.74
CTNSO60931 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.66■□□□□ 0.74
CTNSO60931 AC092437.1-201ENST00000624794 1048 ntBASIC19.66■□□□□ 0.74
CTNSO60931 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CTNSO60931 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CTNSO60931 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CTNSO60931 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.65■□□□□ 0.74
CTNSO60931 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CTNSO60931 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CTNSO60931 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.65■□□□□ 0.74
CTNSO60931 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.65■□□□□ 0.74
CTNSO60931 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CTNSO60931 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CTNSO60931 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTNSO60931 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.64■□□□□ 0.73
CTNSO60931 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.64■□□□□ 0.73
CTNSO60931 AL137784.2-201ENST00000607332 1000 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms