Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
PRAMEF4O60810 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRAMEF4O60810 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRAMEF4O60810 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PRAMEF4O60810 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 AP004607.4-201ENST00000530158 1459 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L2-201ENST00000561772 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 AC138907.5-202ENST00000569484 235 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L6-201ENST00000626483 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L1-201ENST00000627662 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L8-201ENST00000629013 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L3-201ENST00000630187 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L7-201ENST00000630678 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 DUX4L5-201ENST00000630834 1275 ntBASIC20.18■□□□□ 0.82
PRAMEF4O60810 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
PRAMEF4O60810 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRAMEF4O60810 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 AC104187.1-201ENST00000607510 612 ntBASIC20.17■□□□□ 0.82
PRAMEF4O60810 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 AC004854.2-201ENST00000608450 1441 ntBASIC20.17■□□□□ 0.82
PRAMEF4O60810 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.17■□□□□ 0.82
PRAMEF4O60810 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRAMEF4O60810 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.16■□□□□ 0.82
PRAMEF4O60810 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRAMEF4O60810 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 PLK5-205ENST00000642079 1969 ntBASIC20.15■□□□□ 0.82
PRAMEF4O60810 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PRAMEF4O60810 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRAMEF4O60810 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms