Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PRICKLE3O43900 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PRICKLE3O43900 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 BID-214ENST00000617586 542 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.19■□□□□ 0.82
PRICKLE3O43900 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PRICKLE3O43900 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.18■□□□□ 0.82
PRICKLE3O43900 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PRICKLE3O43900 DUX4L16-201ENST00000555130 1264 ntBASIC20.18■□□□□ 0.82
PRICKLE3O43900 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.18■□□□□ 0.82
PRICKLE3O43900 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 AC080038.1-201ENST00000611274 1154 ntBASIC20.17■□□□□ 0.82
PRICKLE3O43900 AC010536.3-201ENST00000620306 533 ntBASIC20.17■□□□□ 0.82
PRICKLE3O43900 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.17■□□□□ 0.82
PRICKLE3O43900 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PRICKLE3O43900 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 RAP2CP1-201ENST00000605103 478 ntBASIC20.16■□□□□ 0.82
PRICKLE3O43900 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.16■□□□□ 0.82
PRICKLE3O43900 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PRICKLE3O43900 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PRICKLE3O43900 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PRICKLE3O43900 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
PRICKLE3O43900 AC243732.1-201ENST00000612648 864 ntBASIC20.15■□□□□ 0.82
PRICKLE3O43900 RARRES2P11-201ENST00000635158 484 ntBASIC20.15■□□□□ 0.82
PRICKLE3O43900 RBM17P2-201ENST00000616397 1405 ntBASIC20.15■□□□□ 0.82
PRICKLE3O43900 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRICKLE3O43900 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PRICKLE3O43900 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.15■□□□□ 0.82
PRICKLE3O43900 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PRICKLE3O43900 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
PRICKLE3O43900 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRICKLE3O43900 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRICKLE3O43900 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PRICKLE3O43900 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 CDCA4P2-201ENST00000441182 718 ntBASIC20.14■□□□□ 0.81
PRICKLE3O43900 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.14■□□□□ 0.81
PRICKLE3O43900 AC073111.5-205ENST00000641717 521 ntBASIC20.14■□□□□ 0.81
PRICKLE3O43900 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PRICKLE3O43900 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms