Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SMAD6O43541 AC006970.2-201ENST00000450065 779 ntBASIC21.28■■□□□ 1
SMAD6O43541 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.28■■□□□ 1
SMAD6O43541 AC005181.1-201ENST00000604782 1256 ntBASIC21.28■■□□□ 1
SMAD6O43541 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.28■■□□□ 1
SMAD6O43541 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 RBM17P2-201ENST00000616397 1405 ntBASIC21.28■■□□□ 1
SMAD6O43541 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SMAD6O43541 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMAD6O43541 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SMAD6O43541 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SMAD6O43541 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMAD6O43541 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SMAD6O43541 ID1-201ENST00000376105 1233 ntBASIC21.27■■□□□ 1
SMAD6O43541 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.27■■□□□ 1
SMAD6O43541 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.27■■□□□ 1
SMAD6O43541 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.27■■□□□ 1
SMAD6O43541 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.27■■□□□ 1
SMAD6O43541 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SMAD6O43541 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMAD6O43541 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.26■□□□□ 0.99
SMAD6O43541 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SMAD6O43541 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
SMAD6O43541 HLA-L-209ENST00000420110 1011 ntBASIC21.26■□□□□ 0.99
SMAD6O43541 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SMAD6O43541 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.26■□□□□ 0.99
SMAD6O43541 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.26■□□□□ 0.99
SMAD6O43541 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.26■□□□□ 0.99
SMAD6O43541 AC013268.1-206ENST00000638368 961 ntBASIC21.26■□□□□ 0.99
SMAD6O43541 AC112229.1-201ENST00000639295 961 ntBASIC21.26■□□□□ 0.99
SMAD6O43541 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.25■□□□□ 0.99
SMAD6O43541 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.25■□□□□ 0.99
SMAD6O43541 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SMAD6O43541 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.25■□□□□ 0.99
SMAD6O43541 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SMAD6O43541 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SMAD6O43541 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.25■□□□□ 0.99
SMAD6O43541 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.25■□□□□ 0.99
SMAD6O43541 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.25■□□□□ 0.99
SMAD6O43541 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SMAD6O43541 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SMAD6O43541 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.24■□□□□ 0.99
SMAD6O43541 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SMAD6O43541 AC068338.2-201ENST00000563278 1430 ntBASIC21.24■□□□□ 0.99
SMAD6O43541 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.24■□□□□ 0.99
SMAD6O43541 NCF1B-203ENST00000435988 1254 ntBASIC21.24■□□□□ 0.99
SMAD6O43541 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.24■□□□□ 0.99
SMAD6O43541 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.24■□□□□ 0.99
SMAD6O43541 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.24■□□□□ 0.99
SMAD6O43541 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.24■□□□□ 0.99
SMAD6O43541 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.24■□□□□ 0.99
SMAD6O43541 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.24■□□□□ 0.99
SMAD6O43541 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
SMAD6O43541 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.24■□□□□ 0.99
SMAD6O43541 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMAD6O43541 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
SMAD6O43541 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.23■□□□□ 0.99
SMAD6O43541 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.23■□□□□ 0.99
SMAD6O43541 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.23■□□□□ 0.99
SMAD6O43541 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMAD6O43541 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.23■□□□□ 0.99
SMAD6O43541 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMAD6O43541 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.22■□□□□ 0.99
SMAD6O43541 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SMAD6O43541 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.22■□□□□ 0.99
SMAD6O43541 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms