Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 CDV3P1-201ENST00000471403 739 ntBASIC19.45■□□□□ 0.7
NKX2-8O15522 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
NKX2-8O15522 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
NKX2-8O15522 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NKX2-8O15522 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.45■□□□□ 0.7
NKX2-8O15522 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.45■□□□□ 0.7
NKX2-8O15522 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-8O15522 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 UBE2SP1-201ENST00000450587 669 ntBASIC19.44■□□□□ 0.7
NKX2-8O15522 AC060766.5-201ENST00000590539 871 ntBASIC19.44■□□□□ 0.7
NKX2-8O15522 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.44■□□□□ 0.7
NKX2-8O15522 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NKX2-8O15522 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NKX2-8O15522 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.44■□□□□ 0.7
NKX2-8O15522 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
NKX2-8O15522 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NKX2-8O15522 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.44■□□□□ 0.7
NKX2-8O15522 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.44■□□□□ 0.7
NKX2-8O15522 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.43■□□□□ 0.7
NKX2-8O15522 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
NKX2-8O15522 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NKX2-8O15522 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
NKX2-8O15522 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.43■□□□□ 0.7
NKX2-8O15522 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-8O15522 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 AC245052.3-201ENST00000450182 901 ntBASIC19.43■□□□□ 0.7
NKX2-8O15522 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.43■□□□□ 0.7
NKX2-8O15522 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.43■□□□□ 0.7
NKX2-8O15522 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.43■□□□□ 0.7
NKX2-8O15522 AC100791.3-201ENST00000617619 330 ntBASIC19.43■□□□□ 0.7
NKX2-8O15522 HLA-B-256ENST00000639848 1089 ntBASIC19.43■□□□□ 0.7
NKX2-8O15522 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NKX2-8O15522 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NKX2-8O15522 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NKX2-8O15522 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-8O15522 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
NKX2-8O15522 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NKX2-8O15522 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-8O15522 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
NKX2-8O15522 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.42■□□□□ 0.7
NKX2-8O15522 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-8O15522 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-8O15522 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NKX2-8O15522 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-8O15522 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX2-8O15522 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NKX2-8O15522 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NKX2-8O15522 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-8O15522 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.41■□□□□ 0.7
NKX2-8O15522 AL589743.5-201ENST00000616611 1050 ntBASIC19.41■□□□□ 0.7
NKX2-8O15522 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
NKX2-8O15522 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-8O15522 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-8O15522 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-8O15522 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX2-8O15522 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms