Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.43■□□□□ 0.86
CDX4O14627 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 SOX15-203ENST00000570788 1093 ntBASIC20.43■□□□□ 0.86
CDX4O14627 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CDX4O14627 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDX4O14627 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.43■□□□□ 0.86
CDX4O14627 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.43■□□□□ 0.86
CDX4O14627 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.43■□□□□ 0.86
CDX4O14627 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
CDX4O14627 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 MCRIP2P1-201ENST00000394346 511 ntBASIC20.42■□□□□ 0.86
CDX4O14627 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDX4O14627 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 CDV3P1-201ENST00000471403 739 ntBASIC20.42■□□□□ 0.86
CDX4O14627 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.42■□□□□ 0.86
CDX4O14627 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.42■□□□□ 0.86
CDX4O14627 AC233702.5-201ENST00000584107 538 ntBASIC20.42■□□□□ 0.86
CDX4O14627 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.42■□□□□ 0.86
CDX4O14627 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDX4O14627 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDX4O14627 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDX4O14627 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDX4O14627 AC137767.1-201ENST00000602918 1920 ntBASIC20.41■□□□□ 0.86
CDX4O14627 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDX4O14627 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.41■□□□□ 0.86
CDX4O14627 AC012618.2-201ENST00000428058 849 ntBASIC20.41■□□□□ 0.86
CDX4O14627 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.41■□□□□ 0.86
CDX4O14627 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.41■□□□□ 0.86
CDX4O14627 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.41■□□□□ 0.86
CDX4O14627 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CDX4O14627 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.41■□□□□ 0.86
CDX4O14627 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDX4O14627 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDX4O14627 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.41■□□□□ 0.86
CDX4O14627 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.4■□□□□ 0.86
CDX4O14627 RPS2P55-201ENST00000397318 883 ntBASIC20.4■□□□□ 0.86
CDX4O14627 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 TSPY7P-201ENST00000431358 1114 ntBASIC20.4■□□□□ 0.86
CDX4O14627 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.4■□□□□ 0.86
CDX4O14627 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 AC107956.1-201ENST00000494359 873 ntBASIC20.4■□□□□ 0.86
CDX4O14627 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDX4O14627 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDX4O14627 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDX4O14627 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.39■□□□□ 0.86
CDX4O14627 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDX4O14627 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDX4O14627 KRT17P2-201ENST00000300992 1314 ntBASIC20.39■□□□□ 0.85
CDX4O14627 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDX4O14627 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDX4O14627 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.39■□□□□ 0.85
CDX4O14627 KRT18P68-201ENST00000392293 1000 ntBASIC20.39■□□□□ 0.85
CDX4O14627 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDX4O14627 POM121L13P-201ENST00000422362 380 ntBASIC20.39■□□□□ 0.85
CDX4O14627 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.39■□□□□ 0.85
CDX4O14627 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.39■□□□□ 0.85
CDX4O14627 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDX4O14627 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDX4O14627 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.39■□□□□ 0.85
CDX4O14627 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.38■□□□□ 0.85
CDX4O14627 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.38■□□□□ 0.85
CDX4O14627 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDX4O14627 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CDX4O14627 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.38■□□□□ 0.85
CDX4O14627 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDX4O14627 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CDX4O14627 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CDX4O14627 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDX4O14627 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDX4O14627 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDX4O14627 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.38■□□□□ 0.85
CDX4O14627 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDX4O14627 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.37■□□□□ 0.85
CDX4O14627 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDX4O14627 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.37■□□□□ 0.85
CDX4O14627 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.37■□□□□ 0.85
CDX4O14627 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.37■□□□□ 0.85
CDX4O14627 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.37■□□□□ 0.85
CDX4O14627 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDX4O14627 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDX4O14627 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDX4O14627 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDX4O14627 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms