Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOX1O00570 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC22.61■■□□□ 1.21
SOX1O00570 AC113347.1-201ENST00000413321 391 ntBASIC22.61■■□□□ 1.21
SOX1O00570 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC22.61■■□□□ 1.21
SOX1O00570 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOX1O00570 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.61■■□□□ 1.21
SOX1O00570 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.61■■□□□ 1.21
SOX1O00570 KRT126P-201ENST00000549467 1181 ntBASIC22.61■■□□□ 1.21
SOX1O00570 KRT8P9-201ENST00000558927 1449 ntBASIC22.61■■□□□ 1.21
SOX1O00570 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.61■■□□□ 1.21
SOX1O00570 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOX1O00570 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SOX1O00570 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
SOX1O00570 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.6■■□□□ 1.21
SOX1O00570 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SOX1O00570 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SOX1O00570 KRASP1-201ENST00000407852 552 ntBASIC22.6■■□□□ 1.21
SOX1O00570 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.6■■□□□ 1.21
SOX1O00570 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.6■■□□□ 1.21
SOX1O00570 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
SOX1O00570 DUX4L26-201ENST00000489078 1255 ntBASIC22.6■■□□□ 1.21
SOX1O00570 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
SOX1O00570 AC100791.3-201ENST00000617619 330 ntBASIC22.6■■□□□ 1.21
SOX1O00570 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SOX1O00570 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
SOX1O00570 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SOX1O00570 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SOX1O00570 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SOX1O00570 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SOX1O00570 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SOX1O00570 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22.59■■□□□ 1.21
SOX1O00570 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.59■■□□□ 1.21
SOX1O00570 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.59■■□□□ 1.21
SOX1O00570 METTL23-204ENST00000586752 904 ntTSL 2 BASIC22.59■■□□□ 1.21
SOX1O00570 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.59■■□□□ 1.21
SOX1O00570 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.59■■□□□ 1.21
SOX1O00570 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SOX1O00570 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.59■■□□□ 1.21
SOX1O00570 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SOX1O00570 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SOX1O00570 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SOX1O00570 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.58■■□□□ 1.21
SOX1O00570 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.58■■□□□ 1.21
SOX1O00570 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SOX1O00570 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.58■■□□□ 1.21
SOX1O00570 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SOX1O00570 Six3os1_6.1-201ENST00000620790 196 ntBASIC22.58■■□□□ 1.21
SOX1O00570 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SOX1O00570 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SOX1O00570 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
SOX1O00570 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SOX1O00570 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SOX1O00570 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
SOX1O00570 TERF1P1-201ENST00000311003 1181 ntBASIC22.57■■□□□ 1.2
SOX1O00570 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SOX1O00570 UPK3BP1-201ENST00000428678 509 ntBASIC22.57■■□□□ 1.2
SOX1O00570 AC104076.2-201ENST00000448912 469 ntBASIC22.57■■□□□ 1.2
SOX1O00570 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.57■■□□□ 1.2
SOX1O00570 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.57■■□□□ 1.2
SOX1O00570 AC079089.2-201ENST00000531211 1277 ntBASIC22.57■■□□□ 1.2
SOX1O00570 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SOX1O00570 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SOX1O00570 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.57■■□□□ 1.2
SOX1O00570 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.57■■□□□ 1.2
SOX1O00570 DUSP8P4-201ENST00000399538 1761 ntBASIC22.57■■□□□ 1.2
SOX1O00570 AP006587.3-201ENST00000525742 1516 ntBASIC22.57■■□□□ 1.2
SOX1O00570 OR7E47P-201ENST00000546390 1422 ntBASIC22.57■■□□□ 1.2
SOX1O00570 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.56■■□□□ 1.2
SOX1O00570 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SOX1O00570 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SOX1O00570 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SOX1O00570 AC026396.1-201ENST00000419388 421 ntBASIC22.56■■□□□ 1.2
SOX1O00570 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.56■■□□□ 1.2
SOX1O00570 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.56■■□□□ 1.2
SOX1O00570 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.56■■□□□ 1.2
SOX1O00570 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.56■■□□□ 1.2
SOX1O00570 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.56■■□□□ 1.2
SOX1O00570 FAM21FP-204ENST00000608637 956 ntBASIC22.56■■□□□ 1.2
SOX1O00570 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SOX1O00570 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOX1O00570 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOX1O00570 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOX1O00570 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.55■■□□□ 1.2
SOX1O00570 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
SOX1O00570 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SOX1O00570 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SOX1O00570 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOX1O00570 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.55■■□□□ 1.2
SOX1O00570 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.55■■□□□ 1.2
SOX1O00570 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.55■■□□□ 1.2
SOX1O00570 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.55■■□□□ 1.2
SOX1O00570 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.55■■□□□ 1.2
SOX1O00570 AC073508.3-201ENST00000619697 1419 ntBASIC22.55■■□□□ 1.2
SOX1O00570 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOX1O00570 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
SOX1O00570 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOX1O00570 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms